Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:1938574 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
193857419409612388phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
19409771941960984phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
1942262194261835750S ribosomal protein L20QuickGO ontologyBLASTP
1942669194286619850S ribosomal protein L35QuickGO ontologyBLASTP
19429621943396435translation initiation factor IF-3QuickGO ontologyBLASTP
194350819454361929threonyl-tRNA synthetaseQuickGO ontologyBLASTP
194633419475571224O-antigen polymeraseQuickGO ontologyBLASTP
19482421949096855DNARNA non-specific endonucleaseQuickGO ontologyBLASTP
19491581949406249hypothetical proteinBLASTP
19495491950508960outer membrane proteinQuickGO ontologyBLASTP
19505571951282726outer membrane proteinQuickGO ontologyBLASTP
195160419525369336-phosphofructokinaseQuickGO ontologyBLASTP
19526321952922291hypothetical proteinBLASTP
19530291953889861fructosamine kinaseQuickGO ontologyBLASTP
19539321954468537hypothetical proteinBLASTP
195461719552856692-deoxyglucose-6-phosphataseQuickGO ontologyBLASTP
19554231956022600hypothetical proteinBLASTP
195615919575501392sodiumdicarboxylate symporter family proteinQuickGO ontologyBLASTP
19576521957894243cell division modulatorQuickGO ontologyBLASTP
195826119605132253hydroperoxidase IIQuickGO ontologyBLASTP