Pre_GI: BLASTN Hits

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Query: NC_017986:5421000 Pseudomonas putida ND6 chromosome, complete genome

Start: 5421000, End: 5443306, Length: 22307

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome031360BLASTN svgBLASTP svg
NC_008027:33873663387366341245025085Pseudomonas entomophila L48, complete genome02131BLASTN svgBLASTP svg
NC_015410:30034173003417302693723521Pseudomonas mendocina NK-01 chromosome, complete genome01518BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome0926BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome8e-130472BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome1e-103385BLASTN svgBLASTP svg
NC_008570:2216736*2216736227194055205Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-75289BLASTN svgBLASTP svg
NC_007963:27770662777066279798320918Chromohalobacter salexigens DSM 3043, complete genome2e-68268BLASTN svgBLASTP svg
AP010958:92293792293795098628050Escherichia coli O103:H2 str. 12009 DNA, complete genome8e-56226BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome1e-54222BLASTN svgBLASTP svg
NC_010508:19806891980689200677326085Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence4e-39170BLASTN svgBLASTP svg
NC_009074:21175002117500214668929190Burkholderia pseudomallei 668 chromosome I, complete sequence4e-36161BLASTN svgBLASTP svg
NC_013959:839928399210878124790Sideroxydans lithotrophicus ES-1 chromosome, complete genome6e-35157BLASTN svgBLASTP svg
NC_010501:30131033013103303609922997Pseudomonas putida W619, complete genome3e-24121BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome1e-20109BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_005773:20800020800023117523176Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007510:28051212805121282621621096Burkholderia sp. 383 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_010551:25378762537876256370525830Burkholderia ambifaria MC40-6 chromosome 1, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010622:23859322385932240909923168Burkholderia phymatum STM815 chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_008390:26436532643653267440130749Burkholderia cepacia AMMD chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_005773:48992524899252493544536194Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007298:10298411029841105396624126Dechloromonas aromatica RCB, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020260:32770073277007330315226146Cronobacter sakazakii Sp291, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003143:16910001691000171055719558Yersinia pestis CO92, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004088:29370772937077296291925843Yersinia pestis KIM, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005810:15200001520000154409924100Yersinia pestis biovar Microtus str. 91001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006155:18079021807902182857520674Yersinia pseudotuberculosis IP 32953, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008062:813388133810014818811Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_008149:27731392773139279513521997Yersinia pestis Nepal516, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008150:90500090500092909924100Yersinia pestis Antiqua, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008544:55451554517864523195Burkholderia cenocepacia HI2424 chromosome 3, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_010465:28205002820500286978249283Yersinia pseudotuberculosis YPIII, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:18095001809500182909919600Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004578:51921105192110522245930350Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019940:28348502834850285310318254Thioflavicoccus mobilis 8321 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010804:25186952518695254148822794Burkholderia multivorans ATCC 17616 chromosome 1, complete4e-0867.9BLASTN svgBLASTP svg
NC_008609:39211133921113395241031298Pelobacter propionicus DSM 2379, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015711:7601733*7601733762447622744Myxococcus fulvus HW-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002939:17383317383319586722035Geobacter sulfurreducens PCA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010571:33224673322467334823125765Opitutus terrae PB90-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011894:32688503268850331029441445Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012791:2832001*2832001286519533195Variovorax paradoxus S110 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015224:17031301703130172897125842Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_019673:7951493*7951493797009918607Saccharothrix espanaensis DSM 44229 complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020054:46541346541348531019898Fibrella aestuarina BUZ 2 drat genome3e-0661.9BLASTN svgBLASTP svg
NC_010505:49904724990472502043129960Methylobacterium radiotolerans JCM 2831, complete genome3e-0661.9BLASTN svgBLASTP svg