Pre_GI: BLASTN Hits

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Query: NC_015379:6714545 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 6714545, End: 6742160, Length: 27616

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:46439014643901466711323213Pseudomonas poae RE*1-1-14, complete genome01905BLASTN svgBLASTP svg
NC_009439:10117410117412533624163Pseudomonas mendocina ymp, complete genome2e-93351BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome8e-44186BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome8e-44186BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-38168BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome2e-23119BLASTN svgBLASTP svg
NC_010501:27960002796000281869522696Pseudomonas putida W619, complete genome4e-21111BLASTN svgBLASTP svg
NC_004129:31230003123000314059917600Pseudomonas fluorescens Pf-5, complete genome1e-18103BLASTN svgBLASTP svg
NC_010501:4311873*4311873433434022468Pseudomonas putida W619, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_002947:46045824604582462867624095Pseudomonas putida KT2440, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007511:71949371949373920719715Burkholderia sp. 383 chromosome 2, complete sequence9e-1693.7BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_005773:57347335734733576109926367Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013282:116649*11664913955822910Cronobacter turicensis, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015379:4282815*4282815430375120937Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,9e-1383.8BLASTN svgBLASTP svg
NC_020260:38365003836500386459928100Cronobacter sakazakii Sp291, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015138:21101492110149213484224694Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-1281.8BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007005:58822055882205592100338799Pseudomonas syringae pv. syringae B728a, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_004129:2034500*2034500206459930100Pseudomonas fluorescens Pf-5, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007492:39543453954345399809943755Pseudomonas fluorescens PfO-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009778:38320003832000386183229833Enterobacter sakazakii ATCC BAA-894, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,9e-1073.8BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007952:19342491934249195801423766Burkholderia xenovorans LB400 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007492:27710212771021280204831028Pseudomonas fluorescens PfO-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013956:25923782592378261009917722Pantoea ananatis LMG 20103 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015379:31755003175500319347517976Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg