Pre_GI: BLASTN Hits

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Query: NC_015275:4493500 Clostridium lentocellum DSM 5427 chromosome, complete genome

Start: 4493500, End: 4511632, Length: 18133

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003366:10917661091766111615524390Clostridium perfringens str. 13, complete genome1e-106394BLASTN svgBLASTP svg
NC_008261:10485151048515107289224378Clostridium perfringens ATCC 13124, complete genome7e-102379BLASTN svgBLASTP svg
NC_009922:25560332556033258448628454Alkaliphilus oremlandii OhILAs, complete genome2e-40174BLASTN svgBLASTP svg
NC_013517:1055854*10558541161670105817Sebaldella termitidis ATCC 33386, complete genome3e-39170BLASTN svgBLASTP svg
NC_014614:284005*28400531809934095Clostridium sticklandii, complete genome5e-35157BLASTN svgBLASTP svg
NC_004557:2289135*2289135231328724153Clostridium tetani E88, complete genome8e-34153BLASTN svgBLASTP svg
NC_014328:12864071286407130824221836Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_014328:43160084316008434476228755Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_010723:14650971465097149459929503Clostridium botulinum E3 str. Alaska E43, complete genome7e-28133BLASTN svgBLASTP svg
NC_010674:14965001496500152566029161Clostridium botulinum B str. Eklund 17B, complete genome7e-28133BLASTN svgBLASTP svg
NC_009922:86826286826289020421943Alkaliphilus oremlandii OhILAs, complete genome3e-21111BLASTN svgBLASTP svg
NC_012563:23845002384500240296118462Clostridium botulinum A2 str. Kyoto, complete genome4e-20107BLASTN svgBLASTP svg
NC_010001:17450891745089177589430806Clostridium phytofermentans ISDg, complete genome6e-19103BLASTN svgBLASTP svg
NC_010674:18229631822963184273319771Clostridium botulinum B str. Eklund 17B, complete genome6e-19103BLASTN svgBLASTP svg
NC_013192:63111631119378730677Leptotrichia buccalis DSM 1135, complete genome2e-18101BLASTN svgBLASTP svg
NC_014376:15866491586649160872922081Clostridium saccharolyticum WM1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010723:19671061967106199111924014Clostridium botulinum E3 str. Alaska E43, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004557:15530001553000157059917600Clostridium tetani E88, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_007907:45616445616447759921436Desulfitobacterium hafniense Y51, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_018664:3009166*3009166304846639301Clostridium acidurici 9a chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014654:11131161113116113933826223Halanaerobium sp. 'sapolanicus' chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_019970:20804192080419209909918681Thermoanaerobacterium thermosaccharolyticum M0795, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_012491:5914500*5914500593863824139Brevibacillus brevis NBRC 100599, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014019:35433893543389356611222724Bacillus megaterium QM B1551 chromosome, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_009922:41143441143444552934096Alkaliphilus oremlandii OhILAs, complete genome2e-0661.9BLASTN svgBLASTP svg