Pre_GI: BLASTN Hits

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Query: NC_013093:2633000 Actinosynnema mirum DSM 43827, complete genome

Start: 2633000, End: 2690980, Length: 57981

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:25476082547608256628018673Actinosynnema mirum DSM 43827, complete genome5e-127464BLASTN svgBLASTP svg
NC_013093:27528552752855277787825024Actinosynnema mirum DSM 43827, complete genome2e-123452BLASTN svgBLASTP svg
NC_013093:24715742471574251123439661Actinosynnema mirum DSM 43827, complete genome4e-118434BLASTN svgBLASTP svg
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome3e-116428BLASTN svgBLASTP svg
NC_013093:45227514522751455763634886Actinosynnema mirum DSM 43827, complete genome6e-108400BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome1e-106396BLASTN svgBLASTP svg
NC_013093:91524891524893740622159Actinosynnema mirum DSM 43827, complete genome6e-105391BLASTN svgBLASTP svg
NC_013093:48905574890557491777827222Actinosynnema mirum DSM 43827, complete genome9e-104387BLASTN svgBLASTP svg
NC_013093:21322842132284215260320320Actinosynnema mirum DSM 43827, complete genome2e-92349BLASTN svgBLASTP svg
NC_013093:37687903768790379044621657Actinosynnema mirum DSM 43827, complete genome7e-80307BLASTN svgBLASTP svg
NC_018750:33153093315309333886923561Streptomyces venezuelae ATCC 10712, complete genome1e-75293BLASTN svgBLASTP svg
NC_013093:73773773773776222824492Actinosynnema mirum DSM 43827, complete genome2e-67266BLASTN svgBLASTP svg
NC_010572:80226980226982859326325Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-45192BLASTN svgBLASTP svg
NC_009921:39990403999040401805519016Frankia sp. EAN1pec, complete genome2e-34157BLASTN svgBLASTP svg
NC_013093:37919123791912381559923688Actinosynnema mirum DSM 43827, complete genome5e-22115BLASTN svgBLASTP svg
NC_014210:5270643*5270643529559924957Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,8e-21111BLASTN svgBLASTP svg
NC_008340:22726922272692229766424973Alkalilimnicola ehrlichei MLHE-1, complete genome2e-18103BLASTN svgBLASTP svg
NC_008618:1206157*1206157123086924713Bifidobacterium adolescentis ATCC 15703, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_013714:1521404*1521404154642725024Bifidobacterium dentium Bd1, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_002939:26170372617037264347926443Geobacter sulfurreducens PCA, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_018750:13900291390029140825618228Streptomyces venezuelae ATCC 10712, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_002695:3994970*3994970401809923130Escherichia coli O157:H7 str. Sakai, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_007712:16014991601499163292631428Sodalis glossinidius str. 'morsitans', complete genome3e-0869.9BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_002928:507749*50774956809960351Bordetella parapertussis 12822, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_002927:506183*50618356896162779Bordetella bronchiseptica RB50, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_013169:513327*51332754059927273Kytococcus sedentarius DSM 20547, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_012808:806432*80643283135724926Methylobacterium extorquens AM1, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_010172:1079127*1079127112780848682Methylobacterium extorquens PA1, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_010498:34885133488513350850119989Escherichia coli SMS-3-5, complete genome2e-0663.9BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome7e-0661.9BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome7e-0661.9BLASTN svgBLASTP svg
CU928145:3608917*3608917363276823852Escherichia coli 55989 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_004337:32497913249791327283723047Shigella flexneri 2a str. 301, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_004741:3240909*3240909326236621458Shigella flexneri 2a str. 2457T, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_011748:3608917*3608917363276823852Escherichia coli 55989, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_011750:3768692*3768692379303824347Escherichia coli IAI39 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome7e-0661.9BLASTN svgBLASTP svg