Pre_GI: BLASTN Hits

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Query: NC_012660:1737423 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 1737423, End: 1766164, Length: 28742

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020209:32620003262000328797525976Pseudomonas poae RE*1-1-14, complete genome04417BLASTN svgBLASTP svg
NC_020209:945000*94500096809923100Pseudomonas poae RE*1-1-14, complete genome01183BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome01051BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome0704BLASTN svgBLASTP svg
NC_010501:18688881868888190527536388Pseudomonas putida W619, complete genome9e-118432BLASTN svgBLASTP svg
NC_015733:1943385*1943385196159918215Pseudomonas putida S16 chromosome, complete genome5e-116426BLASTN svgBLASTP svg
NC_007005:2191500*2191500223078139282Pseudomonas syringae pv. syringae B728a, complete genome3e-99371BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome3e-93351BLASTN svgBLASTP svg
NC_004129:22017802201780222535423575Pseudomonas fluorescens Pf-5, complete genome9e-84319BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome2e-69272BLASTN svgBLASTP svg
NC_003902:35140003514000353798123982Xanthomonas campestris pv. campestris str. ATCC 33913, complete4e-46194BLASTN svgBLASTP svg
NC_010943:325739*32573934942023682Stenotrophomonas maltophilia K279a, complete genome6e-20107BLASTN svgBLASTP svg
NC_015856:11520211152021117726325243Collimonas fungivorans Ter331 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome1e-18103BLASTN svgBLASTP svg
NC_015563:4093650*4093650411960125952Delftia sp. Cs1-4 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_008463:53135275313527535528941763Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012724:14745414745417238824935Burkholderia glumae BGR1 chromosome 1, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012721:20218852021885204943027546Burkholderia glumae BGR1 chromosome 2, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014306:12447211244721126333018610Erwinia billingiae Eb661, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020181:51825685182568520953926972Enterobacter aerogenes EA1509E, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_014562:2871765*2871765290090029136Pantoea vagans C9-1 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003198:44534574453457450773054274Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-1177.8BLASTN svgBLASTP svg
NC_006511:26779642677964270110823145Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC6e-1177.8BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-1075.8BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014323:992978992978103436141384Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-0971.9BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0869.9BLASTN svgBLASTP svg
NC_014562:16982531698253172164923397Pantoea vagans C9-1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013956:35257113525711354815922449Pantoea ananatis LMG 20103 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010694:61498561498564279627812Erwinia tasmaniensis, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011071:27334382733438275792624489Stenotrophomonas maltophilia R551-3, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014100:1144463*1144463117100626544Caulobacter segnis ATCC 21756 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_012917:3565268*3565268359123425967Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_004578:25604732560473258881228340Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_011149:28021992802199282596423766Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0661.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012660:46695004669500468960120102Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013440:5509790*5509790553637126582Haliangium ochraceum DSM 14365, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_015947:27524502752450277630223853Burkholderia sp. JV3 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome3e-0661.9BLASTN svgBLASTP svg