Pre_GI: BLASTN Hits

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Query: NC_011751:4795928 Escherichia coli UMN026 chromosome, complete genome

Start: 4795928, End: 4818828, Length: 22901

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CP002185:45661504566150459009923950Escherichia coli W, complete genome029950BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome029730BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome029710BLASTN svgBLASTP svg
NC_011748:46959324695932471752121590Escherichia coli 55989, complete genome017400BLASTN svgBLASTP svg
CU928145:46959324695932471752121590Escherichia coli 55989 chromosome, complete genome017400BLASTN svgBLASTP svg
NC_010498:46567164656716467519018475Escherichia coli SMS-3-5, complete genome016310BLASTN svgBLASTP svg
NC_008253:45419154541915456410622192Escherichia coli 536, complete genome016190BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome014940BLASTN svgBLASTP svg
NC_004431:48676484867648489054022893Escherichia coli CFT073, complete genome014880BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome014800BLASTN svgBLASTP svg
NC_010468:43051054305105432709121987Escherichia coli ATCC 8739, complete genome014580BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome014570BLASTN svgBLASTP svg
NC_008563:46560004656000467809922100Escherichia coli APEC O1, complete genome014530BLASTN svgBLASTP svg
NC_002695:51648195164819518468719869Escherichia coli O157:H7 str. Sakai, complete genome014500BLASTN svgBLASTP svg
NC_002655:51948045194804521379718994Escherichia coli O157:H7 EDL933, complete genome014490BLASTN svgBLASTP svg
AP010958:50221965022196504082118626Escherichia coli O103:H2 str. 12009 DNA, complete genome014480BLASTN svgBLASTP svg
NC_010473:44094924409492443038920898Escherichia coli str. K-12 substr. DH10B, complete genome014390BLASTN svgBLASTP svg
NC_000913:43074714307471432826120791Escherichia coli K12, complete genome014390BLASTN svgBLASTP svg
CP002516:44312354431235445210920875Escherichia coli KO11, complete genome014390BLASTN svgBLASTP svg
AC_000091:43131674313167433668223516Escherichia coli W3110 DNA, complete genome014390BLASTN svgBLASTP svg
NC_011750:47194774719477473972720251Escherichia coli IAI39 chromosome, complete genome013100BLASTN svgBLASTP svg
NC_007606:38427083842708386376421057Shigella dysenteriae Sd197, complete genome010730BLASTN svgBLASTP svg
NC_021066:3703725*3703725372609922375Raoultella ornithinolytica B6, complete genome0767BLASTN svgBLASTP svg
NC_020064:1854589*1854589187841223824Serratia marcescens FGI94, complete genome2e-75291BLASTN svgBLASTP svg
NC_020064:41255004125500414419318694Serratia marcescens FGI94, complete genome7e-41176BLASTN svgBLASTP svg
NC_015566:1941407*1941407196269221286Serratia sp. AS12 chromosome, complete genome1e-32149BLASTN svgBLASTP svg
NC_010694:63654*636548609922446Erwinia tasmaniensis, complete genome6e-32147BLASTN svgBLASTP svg
NC_014562:19350881935088195391418827Pantoea vagans C9-1 chromosome, complete genome2e-28135BLASTN svgBLASTP svg
NC_014118:13311641331164135459923436Burkholderia sp. CCGE1002 chromosome chromosome 2, complete3e-24121BLASTN svgBLASTP svg
NC_008786:32917003291700331510623407Verminephrobacter eiseniae EF01-2, complete genome8e-22113BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome5e-20107BLASTN svgBLASTP svg
NC_013592:14650151465015148872023706Dickeya dadantii Ech586, complete genome2e-19105BLASTN svgBLASTP svg
NC_012779:2755338*2755338278000524668Edwardsiella ictaluri 93-146, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007712:31630003163000318759924600Sodalis glossinidius str. 'morsitans', complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013592:1056500*1056500108285526356Dickeya dadantii Ech586, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012880:3421500*3421500345764636147Dickeya dadantii Ech703, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007509:366836686033156664Burkholderia sp. 383 chromosome 3, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome2e-0765.9BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012997:59407594078341424008Teredinibacter turnerae T7901, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010995:3745957*3745957379018344227Cellvibrio japonicus Ueda107, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008258:35815833581583360816926587Shigella flexneri 5 str. 8401, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012912:41674294167429418510117673Dickeya zeae Ech1591, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011750:35840003584000361674032741Escherichia coli IAI39 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg