Pre_GI: BLASTN Hits

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Query: NC_010067:632683 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 632683, End: 657997, Length: 25315

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010067:37539713753971377672522755Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete011730BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome08655BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,08631BLASTN svgBLASTP svg
NC_006905:23552902355290237961224323Salmonella enterica subsp. enterica serovar Choleraesuis str08599BLASTN svgBLASTP svg
NC_011080:23426722342672236709924428Salmonella enterica subsp. enterica serovar Newport str. SL254,08592BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,08544BLASTN svgBLASTP svg
NC_011149:22945002294500231681122312Salmonella enterica subsp. enterica serovar Agona str. SL483,08536BLASTN svgBLASTP svg
NC_004631:685357*68535771085325497Salmonella enterica subsp. enterica serovar Typhi Ty2, complete08528BLASTN svgBLASTP svg
NC_003198:22978372297837232227924443Salmonella enterica subsp. enterica serovar Typhi str. CT18,08520BLASTN svgBLASTP svg
NC_006511:682863*68286370873225870Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC08512BLASTN svgBLASTP svg
NC_011080:39764413976441399977023330Salmonella enterica subsp. enterica serovar Newport str. SL254,04976BLASTN svgBLASTP svg
NC_003197:40058574005857402918723331Salmonella typhimurium LT2, complete genome04924BLASTN svgBLASTP svg
NC_011083:40200004020000404339423395Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,04916BLASTN svgBLASTP svg
NC_004631:38096783809678383452924852Salmonella enterica subsp. enterica serovar Typhi Ty2, complete04916BLASTN svgBLASTP svg
NC_003198:38241873824187384903924853Salmonella enterica subsp. enterica serovar Typhi str. CT18,04916BLASTN svgBLASTP svg
NC_010102:39554793955479397940323925Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,04914BLASTN svgBLASTP svg
NC_011149:39303583930358395376323406Salmonella enterica subsp. enterica serovar Agona str. SL483,04845BLASTN svgBLASTP svg
NC_006511:37940173794017381725023234Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC04813BLASTN svgBLASTP svg
NC_006905:39427533942753396819425442Salmonella enterica subsp. enterica serovar Choleraesuis str04086BLASTN svgBLASTP svg
NC_013421:29722692972269300638334115Pectobacterium wasabiae WPP163, complete genome5e-153549BLASTN svgBLASTP svg
NC_009648:22527572252757228316130405Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-133484BLASTN svgBLASTP svg
NC_010634:31557413155741318046024720Yersinia pseudotuberculosis PB1/+, complete genome7e-75289BLASTN svgBLASTP svg
NC_015061:12519051251905128092529021Rahnella sp. Y9602 chromosome, complete genome3e-74287BLASTN svgBLASTP svg
NC_006155:32379903237990326294924960Yersinia pseudotuberculosis IP 32953, complete genome4e-70274BLASTN svgBLASTP svg
NC_013508:2587913*2587913262259934687Edwardsiella tarda EIB202, complete genome3e-68268BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome6e-66260BLASTN svgBLASTP svg
NC_012779:26648492664849268361918771Edwardsiella ictaluri 93-146, complete genome9e-62246BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome1e-57232BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome1e-54222BLASTN svgBLASTP svg
NC_008321:21900002190000221007020071Shewanella sp. MR-4, complete genome8e-50206BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-32147BLASTN svgBLASTP svg
NC_007298:3764048*3764048379032226275Dechloromonas aromatica RCB, complete genome2e-29139BLASTN svgBLASTP svg
NC_015224:32917363291736331359921864Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,6e-29137BLASTN svgBLASTP svg
NC_007645:34347953434795345695122157Hahella chejuensis KCTC 2396, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015458:19388601938860196301624157Pusillimonas sp. T7-7 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015222:14925001492500151210019601Nitrosomonas sp. AL212 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010170:39442283944228399478350556Bordetella petrii, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015572:25419682541968256409922132Methylomonas methanica MC09 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015731:13817371381737140468922953Nitrosomonas sp. Is79A3 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009092:179226*17922620808728862Shewanella loihica PV-4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013961:2370994*2370994240176230769Erwinia amylovora, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020064:37904723790472381935828887Serratia marcescens FGI94, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005126:48575004857500488024422745Photorhabdus luminescens subsp. laumondii TTO1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg