Pre_GI: BLASTN Hits

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Query: NC_009434:3434381 Pseudomonas stutzeri A1501, complete genome

Start: 3434381, End: 3464115, Length: 29735

Host Lineage: Pseudomonas stutzeri; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain (A1501; CGMCC 0351) was isolated from rice roots that had been inoculated with strain A15 in a rice paddy in China. It is considered wild-type and has been studied for the nitrogen-fixation process and is used as an inoculant during rice cultivation. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas stutzeri is a nonfluorescent denitrifying bacterium widely distributed in the environment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome05289BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome05285BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome01249BLASTN svgBLASTP svg
NC_002927:960369*96036999159931231Bordetella bronchiseptica RB50, complete genome01191BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome01142BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome01090BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome0987BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome0952BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome0924BLASTN svgBLASTP svg
NC_015740:34862263486226350909922874Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete0872BLASTN svgBLASTP svg
NC_012660:819381*81938184312223742Pseudomonas fluorescens SBW25 chromosome, complete genome0791BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome0698BLASTN svgBLASTP svg
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome3e-59238BLASTN svgBLASTP svg
NC_010170:44630004463000451176948770Bordetella petrii, complete genome1e-52216BLASTN svgBLASTP svg
NC_013124:1439915*1439915146670526791Acidimicrobium ferrooxidans DSM 10331, complete genome2e-50208BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome6e-48200BLASTN svgBLASTP svg
NC_020064:2697116*2697116272016423049Serratia marcescens FGI94, complete genome1e-45192BLASTN svgBLASTP svg
NC_012856:29319952931995295427722283Ralstonia pickettii 12D chromosome 1, complete genome3e-40174BLASTN svgBLASTP svg
NC_021066:839734*83973487672436991Raoultella ornithinolytica B6, complete genome5e-39170BLASTN svgBLASTP svg
NC_014121:1589389*1589389162248733099Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-38168BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome3e-37165BLASTN svgBLASTP svg
NC_008752:16687716687718811421238Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-36163BLASTN svgBLASTP svg
NC_010002:4572573*4572573461858346011Delftia acidovorans SPH-1, complete genome5e-36161BLASTN svgBLASTP svg
NC_008609:20631320631324672140409Pelobacter propionicus DSM 2379, complete genome2e-35159BLASTN svgBLASTP svg
NC_014323:46656104665610471710351494Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-34155BLASTN svgBLASTP svg
NC_014915:1331459*1331459135560624148Geobacillus sp. Y412MC52 chromosome, complete genome8e-32147BLASTN svgBLASTP svg
NC_013411:2191514*2191514221566224149Geobacillus sp. Y412MC61, complete genome8e-32147BLASTN svgBLASTP svg
NC_004547:2470978*2470978249481623839Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-31145BLASTN svgBLASTP svg
NC_007908:11084941108494116189953406Rhodoferax ferrireducens T118, complete genome3e-31145BLASTN svgBLASTP svg
NC_010694:21380002138000218529147292Erwinia tasmaniensis, complete genome3e-31145BLASTN svgBLASTP svg
NC_015663:3586836*3586836361030823473Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-31145BLASTN svgBLASTP svg
NC_015635:3860570*3860570389185531286Microlunatus phosphovorus NM-1, complete genome5e-30141BLASTN svgBLASTP svg
NC_013204:989103989103101209922997Eggerthella lenta DSM 2243, complete genome5e-30141BLASTN svgBLASTP svg
NC_007643:3799425*3799425383775538331Rhodospirillum rubrum ATCC 11170, complete genome7e-29137BLASTN svgBLASTP svg
NC_013446:45116024511602453459922998Comamonas testosteroni CNB-2, complete genome7e-29137BLASTN svgBLASTP svg
NC_013508:1491945*1491945152068628742Edwardsiella tarda EIB202, complete genome7e-29137BLASTN svgBLASTP svg
NC_013716:1918664*1918664194320924546Citrobacter rodentium ICC168, complete genome7e-29137BLASTN svgBLASTP svg
NC_013421:2613137*2613137263682223686Pectobacterium wasabiae WPP163, complete genome2e-26129BLASTN svgBLASTP svg
NC_012969:2136243*2136243222535089108Methylovorus glucosetrophus SIP3-4 chromosome, complete genome7e-26127BLASTN svgBLASTP svg
NC_003047:3202125*3202125322912727003Sinorhizobium meliloti 1021, complete genome3e-25125BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-24121BLASTN svgBLASTP svg
NC_010067:11161481116148113933023183Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete4e-24121BLASTN svgBLASTP svg
NC_014500:2479814*2479814250755827745Dickeya dadantii 3937 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_014733:2095996*2095996211863222637Methylovorus sp. MP688 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_002936:10045701004570102326218693Dehalococcoides ethenogenes 195, complete genome3e-19105BLASTN svgBLASTP svg
NC_015731:3658956*3658956368280423849Nitrosomonas sp. Is79A3 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_010725:2589014*2589014261596126948Methylobacterium populi BJ001, complete genome4e-18101BLASTN svgBLASTP svg
NC_010655:1808657*1808657182780319147Akkermansia muciniphila ATCC BAA-835, complete genome4e-18101BLASTN svgBLASTP svg
NC_014935:15118351511835153500523171Nitratifractor saLSUginis DSM 16511 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_006677:1255079*1255079128032225244Gluconobacter oxydans 621H, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_007643:4294818*4294818431506320246Rhodospirillum rubrum ATCC 11170, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010645:558974*55897458259923626Bordetella avium 197N, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010337:2950500*2950500297409923600Heliobacterium modesticaldum Ice1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015161:758929*75892978593127003Deinococcus proteolyticus MRP chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome6e-1487.7BLASTN svgBLASTP svg
NC_005125:34202703420270344513224863Gloeobacter violaceus PCC 7421, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020302:10741201074120109337319254Corynebacterium halotolerans YIM 70093 = DSM 44683, complete2e-1385.7BLASTN svgBLASTP svg
NC_019940:33417943341794336057818785Thioflavicoccus mobilis 8321 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_018750:50787055078705510289824194Streptomyces venezuelae ATCC 10712, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014210:14403614403616380119766Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,4e-1281.8BLASTN svgBLASTP svg
NC_010831:12240001224000125317729178Chlorobium phaeobacteroides BS1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007519:1782067*1782067181840436338Desulfovibrio alaskensis G20 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_019940:112993329933Thioflavicoccus mobilis 8321 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_011894:71093747109374713217722804Methylobacterium nodulans ORS 2060, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010804:2960352*2960352297848118130Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-1075.8BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013961:1622616*1622616167386551250Erwinia amylovora, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_021064:17059611705961172851422554Propionibacterium avidum 44067, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015953:47469834746983477386726885Streptomyces sp. SirexAA-E chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014391:60008346000834602389723064Micromonospora aurantiaca ATCC 27029 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_002516:23067762306776232728720512Pseudomonas aeruginosa PAO1, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_008782:867344*86734489009922756Acidovorax sp. JS42, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008786:38459883845988387218826201Verminephrobacter eiseniae EF01-2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011060:3000067*3000067302749927433Pelodictyon phaeoclathratiforme BU-1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_001263:13786051378605140253323929Deinococcus radiodurans R1 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_008699:11327901132790117213739348Nocardioides sp. JS614, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010162:10208521102085211023231523795Sorangium cellulosum 'So ce 56', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010634:2252329*2252329227409821770Yersinia pseudotuberculosis PB1/+, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015224:2095816*2095816211873722922Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014033:77275477275479465621903Prevotella ruminicola 23 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014831:78601178601180816322153Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015850:1060000*1060000108209922100Acidithiobacillus caldus SM-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015850:16149651614965163735922395Acidithiobacillus caldus SM-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015850:18507411850741187384623106Acidithiobacillus caldus SM-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015850:21749521749524458327089Acidithiobacillus caldus SM-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015851:181721*18172120348521765Acidithiobacillus caldus SM-1 megaplasmid, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome3e-0661.9BLASTN svgBLASTP svg