Pre_GI: BLASTN Hits

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Query: NC_009434:3413461 Pseudomonas stutzeri A1501, complete genome

Start: 3413461, End: 3432584, Length: 19124

Host Lineage: Pseudomonas stutzeri; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain (A1501; CGMCC 0351) was isolated from rice roots that had been inoculated with strain A15 in a rice paddy in China. It is considered wild-type and has been studied for the nitrogen-fixation process and is used as an inoculant during rice cultivation. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas stutzeri is a nonfluorescent denitrifying bacterium widely distributed in the environment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome01326BLASTN svgBLASTP svg
NC_015410:1202370*1202370122824825879Pseudomonas mendocina NK-01 chromosome, complete genome01148BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome01025BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome01009BLASTN svgBLASTP svg
NC_012660:819381*81938184312223742Pseudomonas fluorescens SBW25 chromosome, complete genome7e-133482BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome2e-114420BLASTN svgBLASTP svg
NC_013508:1491945*1491945152068628742Edwardsiella tarda EIB202, complete genome8e-31143BLASTN svgBLASTP svg
NC_010501:90800090800093935831359Pseudomonas putida W619, complete genome3e-30141BLASTN svgBLASTP svg
NC_020064:2697116*2697116272016423049Serratia marcescens FGI94, complete genome5e-29137BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome2e-28135BLASTN svgBLASTP svg
NC_014500:2479814*2479814250755827745Dickeya dadantii 3937 chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome1e-23119BLASTN svgBLASTP svg
NC_012587:1181004*1181004120298621983Rhizobium sp. NGR234, complete genome1e-23119BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome2e-19105BLASTN svgBLASTP svg
NC_007404:974461974461101843943979Thiobacillus denitrificans ATCC 25259, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004631:1182883*1182883121459931717Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-1489.7BLASTN svgBLASTP svg
NC_003198:1771432*1771432180593534504Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1489.7BLASTN svgBLASTP svg
NC_021066:839734*83973487672436991Raoultella ornithinolytica B6, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_011985:3282924*3282924330901226089Agrobacterium radiobacter K84 chromosome 1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012850:3867743*3867743389224624504Rhizobium leguminosarum bv. trifolii WSM1325, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005085:1096000*1096000111962323624Chromobacterium violaceum ATCC 12472, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_004129:5846415*5846415588159935185Pseudomonas fluorescens Pf-5, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_013961:1622616*1622616167386551250Erwinia amylovora, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_014121:1589389*1589389162248733099Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_008380:4532969*4532969455742124453Rhizobium leguminosarum bv. viciae 3841, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008254:3246306*3246306327014823843Mesorhizobium sp. BNC1, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_015593:2447844*2447844246959921756Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete6e-1073.8BLASTN svgBLASTP svg
NC_008767:2160000*2160000218237122372Neisseria meningitidis FAM18, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007626:1746475*1746475178760841134Magnetospirillum magneticum AMB-1, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_004547:2470978*2470978249481623839Erwinia carotovora subsp. atroseptica SCRI1043, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008048:2838769*2838769286662127853Sphingopyxis alaskensis RB2256, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008609:97586797586799879422928Pelobacter propionicus DSM 2379, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010994:4071131*4071131409424623116Rhizobium etli CIAT 652, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_002927:383760*38376040679123032Bordetella bronchiseptica RB50, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014210:397922*39792241759919678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_007912:41259704125970415108425115Saccharophagus degradans 2-40, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007761:3962474*3962474398568423211Rhizobium etli CFN 42, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006087:676318*67631869499818681Leifsonia xyli subsp. xyli str. CTCB07, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011420:2692857*2692857271509922243Rhodospirillum centenum SW, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-0661.9BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_010169:1599936*1599936162443724502Brucella suis ATCC 23445 chromosome I, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_012587:2744731*2744731277030625576Rhizobium sp. NGR234, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_016025:59667059667062579729128Candidatus Chloracidobacterium thermophilum B chromosome chromosome2e-0661.9BLASTN svgBLASTP svg
NC_003063:757999*75799978308325085Agrobacterium tumefaciens str. C58 chromosome linear, complete2e-0661.9BLASTN svgBLASTP svg
NC_021177:5697210*5697210572187724668Streptomyces fulvissimus DSM 40593, complete genome9e-0660BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_013131:15938401593840162389230053Catenulispora acidiphila DSM 44928, complete genome9e-0660BLASTN svgBLASTP svg