Query: NC_008463:4743296 Pseudomonas aeruginosa UCBPP-PA14, complete genome
Start: 4743296, End: 4769099, Length: 25804
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002516:891000 | 891000 | 913571 | 22572 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 15930 | BLASTN svg | BLASTP svg |
NC_011770:4924127 | 4924127 | 4972099 | 47973 | Pseudomonas aeruginosa LESB58, complete genome | 0 | 10170 | BLASTN svg | BLASTP svg |
NC_021150:4350461 | 4350461 | 4373775 | 23315 | Azotobacter vinelandii CA6, complete genome | 2e-130 | 474 | BLASTN svg | BLASTP svg |
NC_012560:4350465 | 4350465 | 4373779 | 23315 | Azotobacter vinelandii DJ, complete genome | 2e-130 | 474 | BLASTN svg | BLASTP svg |
NC_015410:1324313* | 1324313 | 1350875 | 26563 | Pseudomonas mendocina NK-01 chromosome, complete genome | 3e-111 | 410 | BLASTN svg | BLASTP svg |
NC_002516:1474000 | 1474000 | 1509465 | 35466 | Pseudomonas aeruginosa PAO1, complete genome | 2e-106 | 394 | BLASTN svg | BLASTP svg |
NC_009434:3611738* | 3611738 | 3748875 | 137138 | Pseudomonas stutzeri A1501, complete genome | 6e-100 | 373 | BLASTN svg | BLASTP svg |
NC_004129:5846415* | 5846415 | 5881599 | 35185 | Pseudomonas fluorescens Pf-5, complete genome | 2e-97 | 365 | BLASTN svg | BLASTP svg |
NC_007005:4992730 | 4992730 | 5021328 | 28599 | Pseudomonas syringae pv. syringae B728a, complete genome | 7e-35 | 157 | BLASTN svg | BLASTP svg |
NC_004129:926479 | 926479 | 945099 | 18621 | Pseudomonas fluorescens Pf-5, complete genome | 2e-29 | 139 | BLASTN svg | BLASTP svg |
NC_005773:4797242 | 4797242 | 4817099 | 19858 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_002947:5386489 | 5386489 | 5414167 | 27679 | Pseudomonas putida KT2440, complete genome | 1e-24 | 123 | BLASTN svg | BLASTP svg |
NC_007492:857428 | 857428 | 887335 | 29908 | Pseudomonas fluorescens PfO-1, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
NC_010501:734363 | 734363 | 769099 | 34737 | Pseudomonas putida W619, complete genome | 6e-23 | 117 | BLASTN svg | BLASTP svg |
NC_008027:775896 | 775896 | 802599 | 26704 | Pseudomonas entomophila L48, complete genome | 6e-23 | 117 | BLASTN svg | BLASTP svg |
NC_015379:908904 | 908904 | 971106 | 62203 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_012660:5793200 | 5793200 | 5832609 | 39410 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 9e-22 | 113 | BLASTN svg | BLASTP svg |
NC_020209:3874844 | 3874844 | 3904372 | 29529 | Pseudomonas poae RE*1-1-14, complete genome | 9e-22 | 113 | BLASTN svg | BLASTP svg |
NC_002927:3716894 | 3716894 | 3770392 | 53499 | Bordetella bronchiseptica RB50, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_012997:3651993 | 3651993 | 3674331 | 22339 | Teredinibacter turnerae T7901, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009446:174951 | 174951 | 220269 | 45319 | Dichelobacter nodosus VCS1703A, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007912:3466966* | 3466966 | 3484627 | 17662 | Saccharophagus degradans 2-40, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004459:349500* | 349500 | 400744 | 51245 | Vibrio vulnificus CMCP6 chromosome I, complete sequence | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_011901:2739984 | 2739984 | 2762224 | 22241 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_004088:3382148* | 3382148 | 3406110 | 23963 | Yersinia pestis KIM, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004547:913553 | 913553 | 953342 | 39790 | Erwinia carotovora subsp. atroseptica SCRI1043, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_005810:1130251 | 1130251 | 1154170 | 23920 | Yersinia pestis biovar Microtus str. 91001, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008149:3251196* | 3251196 | 3275951 | 24756 | Yersinia pestis Nepal516, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008150:650899 | 650899 | 673599 | 22701 | Yersinia pestis Antiqua, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010159:1417993 | 1417993 | 1441099 | 23107 | Yersinia pestis Angola, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010634:1342393 | 1342393 | 1367330 | 24938 | Yersinia pseudotuberculosis PB1/+, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014838:589581 | 589581 | 617238 | 27658 | Pantoea sp. At-9b plasmid pPAT9B01, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_020064:3609844* | 3609844 | 3653217 | 43374 | Serratia marcescens FGI94, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003143:1233128 | 1233128 | 1259814 | 26687 | Yersinia pestis CO92, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |