Pre_GI: BLASTN Hits

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Query: NC_008146:1577604 Mycobacterium sp. MCS, complete genome

Start: 1577604, End: 1606756, Length: 29153

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome027490BLASTN svgBLASTP svg
NC_008705:86862386862395099082368Mycobacterium sp. KMS, complete genome02811BLASTN svgBLASTP svg
NC_008705:15370801537080155764220563Mycobacterium sp. KMS, complete genome02811BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome02811BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome02811BLASTN svgBLASTP svg
NC_008146:15358271535827156295027124Mycobacterium sp. MCS, complete genome02811BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome02809BLASTN svgBLASTP svg
NC_008705:5144433*5144433517009925667Mycobacterium sp. KMS, complete genome02809BLASTN svgBLASTP svg
NC_009077:4671417*4671417469950728091Mycobacterium sp. JLS, complete genome02478BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome02478BLASTN svgBLASTP svg
NC_008705:17902221790222183895348732Mycobacterium sp. KMS, complete genome02478BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome02478BLASTN svgBLASTP svg
NC_008705:18399831839983186445724475Mycobacterium sp. KMS, complete genome02476BLASTN svgBLASTP svg
NC_009077:16873041687304172055433251Mycobacterium sp. JLS, complete genome02476BLASTN svgBLASTP svg
NC_009077:17256831725683177988554203Mycobacterium sp. JLS, complete genome02476BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome02476BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome02121BLASTN svgBLASTP svg
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome02119BLASTN svgBLASTP svg
NC_008726:11759991175999119522119223Mycobacterium vanbaalenii PYR-1, complete genome01602BLASTN svgBLASTP svg
NC_014814:54229725422972546967946708Mycobacterium sp. Spyr1 chromosome, complete genome01471BLASTN svgBLASTP svg
NC_009077:47744994774499480744932951Mycobacterium sp. JLS, complete genome01364BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome01360BLASTN svgBLASTP svg
NC_015957:27817402781740280943627697Streptomyces violaceusniger Tu 4113 chromosome, complete genome01185BLASTN svgBLASTP svg
NC_015576:808926*80892683565426729Mycobacterium sp. JDM601 chromosome, complete genome0884BLASTN svgBLASTP svg
NC_015576:14427131442713147609933387Mycobacterium sp. JDM601 chromosome, complete genome0880BLASTN svgBLASTP svg
NC_015576:39766793976679403475658078Mycobacterium sp. JDM601 chromosome, complete genome0874BLASTN svgBLASTP svg
NC_008726:61000061000062882018821Mycobacterium vanbaalenii PYR-1, complete genome0747BLASTN svgBLASTP svg
NC_012803:2195808*2195808224976153954Micrococcus luteus NCTC 2665, complete genome0662BLASTN svgBLASTP svg
NC_012803:13022611302261132380421544Micrococcus luteus NCTC 2665, complete genome0660BLASTN svgBLASTP svg
NC_012803:17531381753138177628023143Micrococcus luteus NCTC 2665, complete genome0660BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome0660BLASTN svgBLASTP svg
NC_012803:361127*36112738262921503Micrococcus luteus NCTC 2665, complete genome5e-175622BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome7e-140505BLASTN svgBLASTP svg
NC_013169:513327*51332754059927273Kytococcus sedentarius DSM 20547, complete genome5e-116426BLASTN svgBLASTP svg
NC_013169:1845735*1845735186893023196Kytococcus sedentarius DSM 20547, complete genome5e-116426BLASTN svgBLASTP svg
NC_014218:16890021689002171187222871Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome1e-92349BLASTN svgBLASTP svg
NC_013169:1058463*1058463108536926907Kytococcus sedentarius DSM 20547, complete genome1e-85325BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome6e-51210BLASTN svgBLASTP svg
NC_009077:47479224747922477085022929Mycobacterium sp. JLS, complete genome5e-42180BLASTN svgBLASTP svg
NC_014814:13240413240415486122458Mycobacterium sp. Spyr1 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_013235:40455894045589406814822560Nakamurella multipartita DSM 44233, complete genome8e-35157BLASTN svgBLASTP svg
NC_014815:658893*65889368838329491Micromonospora sp. L5 chromosome, complete genome5e-33151BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome5e-33151BLASTN svgBLASTP svg
NC_014391:1812500*1812500186094748448Micromonospora aurantiaca ATCC 27029 chromosome, complete genome5e-33151BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome2e-32149BLASTN svgBLASTP svg
NC_013729:863743*86374390229738555Kribbella flavida DSM 17836, complete genome7e-32147BLASTN svgBLASTP svg
NC_013131:997692999769291000446227534Catenulispora acidiphila DSM 44928, complete genome1e-30143BLASTN svgBLASTP svg
NC_013441:27614592761459278449623038Gordonia bronchialis DSM 43247, complete genome5e-30141BLASTN svgBLASTP svg
NC_000962:34740003474000349418120182Mycobacterium tuberculosis H37Rv, complete genome3e-28135BLASTN svgBLASTP svg
NC_002755:34655823465582349023924658Mycobacterium tuberculosis CDC1551, complete genome3e-28135BLASTN svgBLASTP svg
NC_002945:34293153429315345013820824Mycobacterium bovis AF2122/97, complete genome3e-28135BLASTN svgBLASTP svg
NC_004369:43759443759445872021127Corynebacterium efficiens YS-314, complete genome3e-28135BLASTN svgBLASTP svg
NC_008769:34272543427254344807620823Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome3e-28135BLASTN svgBLASTP svg
NC_009525:34849243484924350559920676Mycobacterium tuberculosis H37Ra, complete genome3e-28135BLASTN svgBLASTP svg
NC_009565:34857723485772350477419003Mycobacterium tuberculosis F11, complete genome3e-28135BLASTN svgBLASTP svg
NC_012207:34211443421144344072619583Mycobacterium bovis BCG str. Tokyo 172, complete genome3e-28135BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome1e-27133BLASTN svgBLASTP svg
NC_013235:13544431354443137485420412Nakamurella multipartita DSM 44233, complete genome1e-27133BLASTN svgBLASTP svg
NC_010612:46795944679594471951939926Mycobacterium marinum M, complete genome1e-27133BLASTN svgBLASTP svg
NC_008578:1827605*1827605185916131557Acidothermus cellulolyticus 11B, complete genome4e-27131BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome4e-27131BLASTN svgBLASTP svg
NC_008726:39159793915979394187225894Mycobacterium vanbaalenii PYR-1, complete genome4e-24121BLASTN svgBLASTP svg
NC_008726:38582093858209387826620058Mycobacterium vanbaalenii PYR-1, complete genome4e-24121BLASTN svgBLASTP svg
NC_003155:64445006444500646671722218Streptomyces avermitilis MA-4680, complete genome4e-18101BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009921:1645380*1645380166750622127Frankia sp. EAN1pec, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013093:1036772*1036772108759950828Actinosynnema mirum DSM 43827, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008726:49476949476951509920331Mycobacterium vanbaalenii PYR-1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_019673:1039258*1039258106559926342Saccharothrix espanaensis DSM 44229 complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015957:10505870105058701052808222213Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014318:13201701320170134146221293Amycolatopsis mediterranei U32 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014215:1243125*1243125126864225518Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,4e-1281.8BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015312:1191633*1191633121600524373Pseudonocardia dioxanivorans CB1190 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014814:3364336*3364336338651822183Mycobacterium sp. Spyr1 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010545:61934661934664304023695Corynebacterium urealyticum DSM 7109, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006958:82808982808984892220834Corynebacterium glutamicum ATCC 13032, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010816:1319921*1319921136369443774Bifidobacterium longum DJO10A, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_018524:50667205066720509078524066Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_018720:18782011878201190278524585Bifidobacterium asteroides PRL2011 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011769:2542000*2542000256409922100Desulfovibrio vulgaris str. 'Miyazaki F', complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008699:16731811673181172409950919Nocardioides sp. JS614, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007759:2748000*2748000277201124012Syntrophus aciditrophicus SB, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006085:1379370*1379370140289723528Propionibacterium acnes KPA171202, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009943:305854*30585433902633173Candidatus Desulfococcus oleovorans Hxd3, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015859:31265003126500314878722288Corynebacterium variabile DSM 44702 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002944:23738732373873239934625474Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002944:865425*86542589916033736Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002944:990009900011707318074Mycobacterium avium subsp. paratuberculosis K-10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004369:531579*53157956209930521Corynebacterium efficiens YS-314, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010830:1451887*1451887147549723611Candidatus Amoebophilus asiaticus 5a2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007164:62816628168338620571Corynebacterium jeikeium K411, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007164:622000*62200065646734468Corynebacterium jeikeium K411, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007164:54765454765457047722824Corynebacterium jeikeium K411, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007164:2261644*2261644228587624233Corynebacterium jeikeium K411, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007164:2068678*2068678209743828761Corynebacterium jeikeium K411, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007164:18391541839154187426735114Corynebacterium jeikeium K411, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012560:19652511965251198886223612Azotobacter vinelandii DJ, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014151:37088237088239435823477Cellulomonas flavigena DSM 20109 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_021150:19652641965264198887523612Azotobacter vinelandii CA6, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_019973:27440002744000276369719698Mesorhizobium australicum WSM2073, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015859:3177199*3177199321545938261Corynebacterium variabile DSM 44702 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015675:28390002839000285961920620Mesorhizobium opportunistum WSM2075 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015422:28068322806832284558938758Alicycliphilus denitrificans K601 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014923:26720002672000269164419645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010730:952574*95257497119218619Sulfurihydrogenibium sp. YO3AOP1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010718:193231*19323123794944719Natranaerobius thermophilus JW/NM-WN-LF, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004193:950000*95000096959919600Oceanobacillus iheyensis HTE831, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome3e-0661.9BLASTN svgBLASTP svg