Query: NC_004347:3028000 Shewanella oneidensis MR-1, complete genome
Start: 3028000, End: 3050217, Length: 22218
Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009831:2045811 | 2045811 | 2069133 | 23323 | Shewanella sediminis HAW-EB3, complete genome | 4e-113 | 416 | BLASTN svg | BLASTP svg |
NC_009052:1899954 | 1899954 | 1923389 | 23436 | Shewanella baltica OS155, complete genome | 3e-46 | 194 | BLASTN svg | BLASTP svg |
NC_009801:995396 | 995396 | 1019468 | 24073 | Escherichia coli E24377A, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
NC_007712:1601499 | 1601499 | 1632926 | 31428 | Sodalis glossinidius str. 'morsitans', complete genome | 8e-25 | 123 | BLASTN svg | BLASTP svg |
NC_002695:3994970* | 3994970 | 4018099 | 23130 | Escherichia coli O157:H7 str. Sakai, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_013716:2476334 | 2476334 | 2498224 | 21891 | Citrobacter rodentium ICC168, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_004741:3240909* | 3240909 | 3262366 | 21458 | Shigella flexneri 2a str. 2457T, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_004337:3249791 | 3249791 | 3272837 | 23047 | Shigella flexneri 2a str. 301, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_000913:3256307* | 3256307 | 3278216 | 21910 | Escherichia coli K12, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
CU928160:3344746* | 3344746 | 3363099 | 18354 | Escherichia coli IAI1 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
CU928145:3608917* | 3608917 | 3632768 | 23852 | Escherichia coli 55989 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
CP002516:613462* | 613462 | 631690 | 18229 | Escherichia coli KO11, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
CP002185:3475991* | 3475991 | 3500052 | 24062 | Escherichia coli W, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
AC_000091:3258377* | 3258377 | 3281480 | 23104 | Escherichia coli W3110 DNA, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_007613:2981829 | 2981829 | 3004385 | 22557 | Shigella boydii Sb227, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_008258:3224721 | 3224721 | 3247194 | 22474 | Shigella flexneri 5 str. 8401, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_011751:3710786 | 3710786 | 3735134 | 24349 | Escherichia coli UMN026 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_011750:3768692* | 3768692 | 3793038 | 24347 | Escherichia coli IAI39 chromosome, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_011748:3608917* | 3608917 | 3632768 | 23852 | Escherichia coli 55989, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_010658:3014371* | 3014371 | 3032599 | 18229 | Shigella boydii CDC 3083-94, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_010473:3354052* | 3354052 | 3377599 | 23548 | Escherichia coli str. K-12 substr. DH10B, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_010468:613812 | 613812 | 633881 | 20070 | Escherichia coli ATCC 8739, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_009801:3595001 | 3595001 | 3613599 | 18599 | Escherichia coli E24377A, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_009800:3307123* | 3307123 | 3325473 | 18351 | Escherichia coli HS, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_002516:891000 | 891000 | 913571 | 22572 | Pseudomonas aeruginosa PAO1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011770:4924127 | 4924127 | 4972099 | 47973 | Pseudomonas aeruginosa LESB58, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_015275:1223088* | 1223088 | 1247195 | 24108 | Clostridium lentocellum DSM 5427 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013961:2441148 | 2441148 | 2460911 | 19764 | Erwinia amylovora, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007712:2897000 | 2897000 | 2915164 | 18165 | Sodalis glossinidius str. 'morsitans', complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_012214:1438476 | 1438476 | 1460054 | 21579 | Erwinia pyrifoliae Ep1/96, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_012912:1200000* | 1200000 | 1226940 | 26941 | Dickeya zeae Ech1591, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010498:3488513 | 3488513 | 3508501 | 19989 | Escherichia coli SMS-3-5, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010159:1668795* | 1668795 | 1688277 | 19483 | Yersinia pestis Angola, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009446:473960* | 473960 | 498514 | 24555 | Dichelobacter nodosus VCS1703A, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |