Pre_GI: BLASTN Hits

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Query: NC_002947:4931476 Pseudomonas putida KT2440, complete genome

Start: 4931476, End: 4957516, Length: 26041

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:1691930*1691930171807626147Pseudomonas putida F1, complete genome025590BLASTN svgBLASTP svg
NC_010501:4080937*4080937410672725791Pseudomonas putida W619, complete genome06879BLASTN svgBLASTP svg
NC_004129:18487011848701187545426754Pseudomonas fluorescens Pf-5, complete genome01740BLASTN svgBLASTP svg
NC_007492:17355951735595175753521941Pseudomonas fluorescens PfO-1, complete genome01685BLASTN svgBLASTP svg
NC_012560:3505235*3505235352968824454Azotobacter vinelandii DJ, complete genome2e-103385BLASTN svgBLASTP svg
NC_021150:3505234*3505234352968724454Azotobacter vinelandii CA6, complete genome2e-103385BLASTN svgBLASTP svg
NC_015422:4395388*4395388441939024003Alicycliphilus denitrificans K601 chromosome, complete genome2e-50208BLASTN svgBLASTP svg
NC_014910:4026613*4026613405112124509Alicycliphilus denitrificans BC chromosome, complete genome2e-50208BLASTN svgBLASTP svg
NC_013851:33002783300278332129021013Allochromatium vinosum DSM 180 chromosome, complete genome3e-49204BLASTN svgBLASTP svg
NC_015563:60678360678362671319931Delftia sp. Cs1-4 chromosome, complete genome1e-45192BLASTN svgBLASTP svg
NC_010002:66169666169668889327198Delftia acidovorans SPH-1, complete genome1e-45192BLASTN svgBLASTP svg
NC_012559:73185973185975630324445Laribacter hongkongensis HLHK9, complete genome4e-36161BLASTN svgBLASTP svg
NC_015138:49059354905935493092624992Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-33153BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence3e-31145BLASTN svgBLASTP svg
NC_009778:12222731222273124884426572Enterobacter sakazakii ATCC BAA-894, complete genome1e-27133BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome4e-21111BLASTN svgBLASTP svg
NC_014366:1814000*1814000183684822849Gamma proteobacterium HdN1, complete genome4e-21111BLASTN svgBLASTP svg
NC_019940:293476*29347631150418029Thioflavicoccus mobilis 8321 chromosome, complete genome4e-18101BLASTN svgBLASTP svg
NC_010515:1618093*1618093165515937067Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_014562:18442681844268187632632059Pantoea vagans C9-1 chromosome, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_012808:594000*59400061960225603Methylobacterium extorquens AM1, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_006177:3192500*3192500321147918980Symbiobacterium thermophilum IAM 14863, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013223:68562868562871386228235Desulfohalobium retbaense DSM 5692, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_009512:21086862108686214231433629Pseudomonas putida F1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_011757:748223*74822379542247200Methylobacterium chloromethanicum CM4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007508:2234080*2234080225476820689Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014837:25868702586870261129224423Pantoea sp. At-9b chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014562:1772842*1772842180089428053Pantoea vagans C9-1 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_003902:2211790*2211790223409922310Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0971.9BLASTN svgBLASTP svg
NC_007912:27683632768363278966221300Saccharophagus degradans 2-40, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010688:2532929*2532929255774124813Xanthomonas campestris pv. campestris, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014500:30717643071764309400622243Dickeya dadantii 3937 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012779:2281700*2281700230559923900Edwardsiella ictaluri 93-146, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002947:48050604805060483118826129Pseudomonas putida KT2440, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007759:1356439*1356439139190335465Syntrophus aciditrophicus SB, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003919:2233000*2233000226150128502Xanthomonas axonopodis pv. citri str. 306, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009654:3849774*3849774388986740094Marinomonas sp. MWYL1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009792:26887472688747271473325987Citrobacter koseri ATCC BAA-895, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome3e-0661.9BLASTN svgBLASTP svg