Pre_GI: BLASTN Hits

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Query: NC_002947:3492379 Pseudomonas putida KT2440, complete genome

Start: 3492379, End: 3517099, Length: 24721

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome03576BLASTN svgBLASTP svg
NC_010501:4311873*4311873433434022468Pseudomonas putida W619, complete genome01221BLASTN svgBLASTP svg
NC_010501:27960002796000281869522696Pseudomonas putida W619, complete genome0912BLASTN svgBLASTP svg
NC_015733:864959*86495989931634358Pseudomonas putida S16 chromosome, complete genome0676BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome0676BLASTN svgBLASTP svg
NC_007005:58822055882205592100338799Pseudomonas syringae pv. syringae B728a, complete genome0644BLASTN svgBLASTP svg
NC_005773:57347335734733576109926367Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-82315BLASTN svgBLASTP svg
NC_009074:3559211*3559211358478825578Burkholderia pseudomallei 668 chromosome I, complete sequence6e-60240BLASTN svgBLASTP svg
NC_006350:3710641*3710641373649425854Burkholderia pseudomallei K96243 chromosome 1, complete sequence6e-60240BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome4e-58234BLASTN svgBLASTP svg
NC_007510:40984340984345009940257Burkholderia sp. 383 chromosome 1, complete sequence1e-57232BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome5e-54220BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome5e-54220BLASTN svgBLASTP svg
NC_008390:40731540731543675629442Burkholderia cepacia AMMD chromosome 1, complete sequence5e-48200BLASTN svgBLASTP svg
NC_005773:16757931675793169861222820Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-47198BLASTN svgBLASTP svg
NC_021150:2451500*2451500248001928520Azotobacter vinelandii CA6, complete genome2e-28135BLASTN svgBLASTP svg
NC_012560:2451500*2451500248009928600Azotobacter vinelandii DJ, complete genome2e-28135BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome9e-22113BLASTN svgBLASTP svg
NC_009512:21086862108686214231433629Pseudomonas putida F1, complete genome9e-22113BLASTN svgBLASTP svg
NC_013855:19677819677823386637089Azospirillum sp. B510 plasmid pAB510a, complete sequence1e-20109BLASTN svgBLASTP svg
NC_014323:4619344*4619344465241733074Herbaspirillum seropedicae SmR1 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_012660:33203303320330335044730118Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_010831:40000400006310923110Chlorobium phaeobacteroides BS1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020209:46439014643901466711323213Pseudomonas poae RE*1-1-14, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015379:67145456714545674216027616Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_011206:26854992685499274159956101Acidithiobacillus ferrooxidans ATCC 53993, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008314:27445532744553278801643464Ralstonia eutropha H16 chromosome 2, complete sequence8e-1383.8BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002947:48050604805060483118826129Pseudomonas putida KT2440, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002947:46045824604582462867624095Pseudomonas putida KT2440, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015942:23163542316354234809931746Acidithiobacillus ferrivorans SS3 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009778:38320003832000386183229833Enterobacter sakazakii ATCC BAA-894, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012779:26198712619871264372223852Edwardsiella ictaluri 93-146, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005773:1851116*1851116187559924484Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014355:18650031865003194366878666Candidatus Nitrospira defluvii, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014914:439285*43928546746428180Taylorella equigenitalis MCE9 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020260:38365003836500386459928100Cronobacter sakazakii Sp291, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012483:72900072900075509926100Acidobacterium capsulatum ATCC 51196, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012483:37315423731542380708575544Acidobacterium capsulatum ATCC 51196, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012483:3000619*3000619302570125083Acidobacterium capsulatum ATCC 51196, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009512:43754524375452440539429943Pseudomonas putida F1, complete genome3e-0661.9BLASTN svgBLASTP svg