Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:134875:136449 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 136449, End: 137306, Length: 858

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011959:972798:989065989065990006942Thermomicrobium roseum DSM 5159, complete genomeUbiA prenyltransferase:PepSY-associated TM helix6e-56217
NC_014960:1735786:178143217814321782310879Anaerolinea thermophila UNI-1, complete genomeputative prenyltransferase2e-48192
NC_012914:469117:499746499746500657912Paenibacillus sp. JDR-2, complete genomeUbiA prenyltransferase3e-47188
NC_012658:2584355:258789525878952588761867Clostridium botulinum Ba4 str. 657 chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase7e-47187
NC_009495:2524000:252942325294232530289867Clostridium botulinum A str. ATCC 3502 chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase6e-47187
NC_009697:2394826:240144624014462402312867Clostridium botulinum A str. ATCC 19397 chromosome, completephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase6e-47187
NC_009698:2367171:237379123737912374657867Clostridium botulinum A str. Hall chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase6e-47187
NC_010516:2511035:251764525176452518511867Clostridium botulinum B1 str. Okra, complete genomeprenyltransferase, UbiA family5e-47187
NC_017297:2575306:257829925782992579165867Clostridium botulinum F str. 230613 chromosome, complete genomeprenyltransferase, UbiA family1e-46186
NC_009699:2576500:257816025781602579026867Clostridium botulinum F str. Langeland chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase1e-46186
NC_012563:2680246:270393527039352704801867Clostridium botulinum A2 str. Kyoto, complete genomeprenyltransferase, UbiA family1e-46186
NC_010520:2585014:259217725921772593043867Clostridium botulinum A3 str. Loch Maree, complete genomeprenyltransferase, UbiA family2e-46186
NC_009523:2769154:276915427691542770137984Roseiflexus sp. RS-1 chromosome, complete genomeUbiA prenyltransferase8e-46184
NC_014394:3036758:306679630667963067671876Gallionella capsiferriformans ES-2 chromosome, complete genomeUbiA prenyltransferase6e-46184
NC_018868:3943088:395703439570343957897864Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomephosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase2e-45182
NC_014253:1197005:122868712286871229586900Methanohalobium evestigatum Z-7303 chromosome, complete genomeprenyltransferase UbiA5e-45181
NC_011725:4870223:487235048723504873237888Bacillus cereus B4264 chromosome, complete genomeUbiA prenyltransferase4e-44178
NC_007484:2222474:223273322327332233605873Nitrosococcus oceani ATCC 19707, complete genomeUbiA prenyltransferase1e-43177
NC_008740:1815743:184599418459941846884891Marinobacter aquaeolei VT8, complete genomeUbiA prenyltransferase2e-43176
NC_015416:1571451:157542515754251576324900Methanosaeta concilii GP-6 chromosome, complete genomeUbiA family prenyltransferase3e-42172
NC_013440:5543667:556059155605915561481891Haliangium ochraceum DSM 14365, complete genomeUbiA prenyltransferase2e-42172
NC_002939:1634843:164731116473111648165855Geobacter sulfurreducens PCA, complete genomehypothetical protein1e-41169
NC_015563:6357653:637122663712266372119894Delftia sp. Cs1-4 chromosome, complete genomeUbiA prenyltransferase4e-40165
NC_009379:304222:324082324082324966885Polynucleobacter sp. QLW-P1DMWA-1, complete genomeUbiA prenyltransferase5e-39161
NC_008609:2254392:227106822710682271925858Pelobacter propionicus DSM 2379, complete genomeUbiA prenyltransferase1e-38160
NC_007517:1561466:157343115734311574291861Geobacter metallireducens GS-15, complete genomehypothetical protein8e-39160
NC_019757:4878417:489256248925624893548987Cylindrospermum stagnale PCC 7417, complete genome4-hydroxybenzoate polyprenyltransferase-like prenyltransferase1e-36153
NC_010814:2074266:208509820850982085952855Geobacter lovleyi SZ, complete genomeUbiA prenyltransferase3e-33142
NC_014033:1664500:167985716798571680735879Prevotella ruminicola 23 chromosome, complete genomeprenyltransferase, UbiA family8e-33140
NC_002977:2719774:274676127467612747651891Methylococcus capsulatus str. Bath, complete genomehypothetical protein1e-31136
NC_018645:2492779:249277924927792493633855Desulfobacula toluolica Tol2, complete genome4-hydroxybenzoate octaprenyltransferase UbiA5e-31134
NC_015501:1200411:120211812021181203008891Porphyromonas asaccharolytica DSM 20707 chromosome, completeUbiA prenyltransferase5e-29128
NC_011071:572346:5887255887255901431419Stenotrophomonas maltophilia R551-3, complete genomeUbiA prenyltransferase4e-25115
NC_015422:704500:7571647571647586121449Alicycliphilus denitrificans K601 chromosome, complete genomeUbiA prenyltransferase9e-25114
NC_017267:3982619:3984611398461139860561446Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeintegral membrane protein2e-24112
NC_015947:568124:5813605813605828231464Burkholderia sp. JV3 chromosome, complete genomeUbiA prenyltransferase5e-23108
NC_015508:251354:2665892665892680581470Agrobacterium sp. H13-3 chromosome linear, complete sequenceubiA prenyltransferase family protein5e-21101
NC_015593:2914384:2927765292776529292041440Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeUbiA prenyltransferase1e-20100
NC_007298:1824335:1837712183771218392231512Dechloromonas aromatica RCB, complete genomeUbiA prenyltransferase:PepSY-associated TM helix4e-2098.6
NC_008702:369965:3722363722363736841449Azoarcus sp. BH72, complete genome4-hydroxybenzoate octaprenyltransferase3e-1995.9
NC_015942:2943127:2950554295055429519841431Acidithiobacillus ferrivorans SS3 chromosome, complete genomeUbiA prenyltransferase5e-1995.1
NC_014207:1366766:1370099137009913715351437Methylotenera sp. 301 chromosome, complete genomeUbiA prenyltransferase2e-1789.7
NC_015376:1431728:1441747144174714432161470Burkholderia gladioli BSR3 chromosome chromosome 2, complete4-hydroxybenzoate octaprenyltransferase2e-1686.7
NC_008554:156744:167066167066167608543Syntrophobacter fumaroxidans MPOB, complete genomeUbiA prenyltransferase3e-1685.9
NC_011666:2335765:2335765233576523372191455Methylocella silvestris BL2, complete genomeUbiA prenyltransferase8e-1684.3
NC_014221:2943950:2942484294248429439531470Truepera radiovictrix DSM 17093 chromosome, complete genomeUbiA prenyltransferase6e-1581.6
NC_008554:156744:165054165054165428375Syntrophobacter fumaroxidans MPOB, complete genomeputative transmembrane potein2e-1480.1
NC_009937:4350132:436387443638744364797924Azorhizobium caulinodans ORS 571, complete genomenodulation protein noeC2e-1273.2