Pre_GI: BLASTP Hits

Some Help

Query: NC_018000:1914945:1920839 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 1920839, End: 1921951, Length: 1113

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008786:3681847:3690955369095536921061152Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 13e-21102
NC_017150:2290681:2318414231841423195441131Acetobacter pasteurianus IFO 3283-01-42C, complete genometransporter substrate-binding periplasmic protein2e-20100
NC_009672:30000:3000930009311631155Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeextracellular solute-binding protein3e-1996.3
NC_016590:548312:5483125483125494121101Burkholderia sp. YI23 chromosome 3, complete sequenceextracellular solute-binding protein7e-1995.1
NC_007492:1193626:1214276121427612154271152Pseudomonas fluorescens PfO-1, complete genomeextracellular solute-binding protein, family 14e-1789.4
NC_020063:2343813:2362308236230823634531146Enterobacteriaceae bacterium strain FGI 57, complete genomespermidine/putrescine-binding periplasmic protein1e-1688.2
NC_019897:3810000:3812967381296738140371071Thermobacillus composti KWC4 chromosome, complete genomespermidine/putrescine-binding periplasmic protein1e-1687.4
NC_015559:1478114:1486459148645914876101152Marinomonas posidonica IVIA-Po-181 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-1685.5
NC_015276:2948923:2954973295497329561241152Marinomonas mediterranea MMB-1 chromosome, complete genomeextracellular solute-binding protein family 13e-1582.8
NC_009922:2721343:2741311274131127423571047Alkaliphilus oremlandii OhILAs, complete genomeextracellular solute-binding protein family 15e-1582.4
NC_012914:469117:4691174691174701871071Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 19e-1374.7
NC_014221:38000:5405354053551231071Truepera radiovictrix DSM 17093 chromosome, complete genomeextracellular solute-binding protein family 12e-1273.6
NC_020829:940692:9802589802589813701113Pseudomonas denitrificans ATCC 13867, complete genomeextracellular solute-binding protein2e-1273.6
NC_016612:3361802:3379230337923033803421113Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputrescine ABC transporter periplasmic-binding protein2e-1273.6
NC_009831:1255995:1257662125766212587621101Shewanella sediminis HAW-EB3, complete genomeextracellular solute-binding protein, family 14e-1272.8
NC_002505:1507860:1521892152189215229291038Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein4e-1272.8
NC_009457:1068000:1080309108030910813461038Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein4e-1272.8
NC_012578:1465302:1479334147933414803711038Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein4e-1272.8
NC_012668:2115228:2121142212114221221791038Vibrio cholerae MJ-1236 chromosome 1, complete sequenceputrescine ABC transporter putrescine-binding protein PotF4e-1272.8
NC_016445:984856:9988879988879999241038Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine transport system substrate-binding protein4e-1272.8
NC_016944:1504888:1518920151892015199571038Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein4e-1272.8
NC_020134:1328302:1342631134263113436891059Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine/putrescine transport system substarte-binding protein PotD9e-1271.6
NC_008309:1155218:1155218115521811562551038Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein3e-1169.7
NC_017059:3404000:3404073340407334052271155Rhodospirillum photometricum DSM 122, complete genomeSpermidine/putrescine-binding periplasmic protein6e-1168.9
NC_009512:1025365:1028350102835010294291080Pseudomonas putida F1, complete genomeextracellular solute-binding protein, family 11e-1068.2
NC_015379:6714545:6732759673275967338591101Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative ABC transporter, periplasmic component1e-1067.8
NC_010278:398521:4181284181284192101083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,spermidine/putrescine-binding periplasmic protein2e-1067
NC_009053:393700:4134014134014144831083Actinobacillus pleuropneumoniae L20, complete genomespermidine/putrescine-binding periplasmic protein 1 precursor2e-1067
NC_010939:405477:4411834411834422651083Actinobacillus pleuropneumoniae serovar 7 str. AP76, completespermidine/putrescine-binding periplasmic protein 1 precursor2e-1066.6
NC_008312:4358134:4377026437702643780901065Trichodesmium erythraeum IMS101, complete genomeextracellular solute-binding protein, family 14e-1066.2
NC_010519:1802294:1824678182467818257631086Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein5e-1065.9
NC_008309:1289370:1310334131033413114191086Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein5e-1065.9
NC_009718:1470972:1474505147450514755391035Fervidobacterium nodosum Rt17-B1, complete genomeextracellular solute-binding protein2e-0963.5
NC_008209:253663:2723772723772734831107Roseobacter denitrificans OCh 114, complete genomespermidine/putrescine-binding periplasmic protein, putative3e-0963.5
NC_016593:762216:7679087679087689811074Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completespermidine/putrescine-binding periplasmic protein4e-0962.8
NC_016048:1930089:1955292195529219563651074Oscillibacter valericigenes Sjm18-20, complete genomespermidine/putrescine ABC transporter spermidine/putrescine-binding protein4e-0962.8
NC_009439:101174:1242421242421253361095Pseudomonas mendocina ymp, complete genomeextracellular solute-binding protein5e-0962.4
NC_002947:4362271:4368119436811943692281110Pseudomonas putida KT2440, complete genomeABC transporter, periplasmic polyamine-binding protein, putative6e-0962
NC_011666:1923776:1937462193746219385711110Methylocella silvestris BL2, complete genomeextracellular solute-binding protein family 18e-0961.6
NC_013173:2305394:2305394230539423064311038Desulfomicrobium baculatum DSM 4028, complete genomeextracellular solute-binding protein family 18e-0961.6
NC_006510:746814:7525867525867536591074Geobacillus kaustophilus HTA426, complete genomespermidine/putrescine ABC transporter (substrate-binding protein)8e-0961.6
NC_016830:3697173:3704398370439837055011104Pseudomonas fluorescens F113 chromosome, complete genomeperiplasmic spermidine putrescine-binding protein9e-0961.6
NC_015379:3175500:3183989318398931850921104Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative putrescine-binding periplasmic protein precursor1e-0861.2
NC_014206:2941575:2955729295572929568021074Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0861.2
NC_008027:3844355:3863214386321438643171104Pseudomonas entomophila L48, complete genomeABC transporter, periplasmic polyamine-binding protein1e-0860.8
NC_012578:1465302:1480483148048314815831101Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein2e-0860.5
NC_002505:1507860:1523041152304115241411101Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein2e-0860.5
NC_009457:1068000:1081457108145710825571101Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein2e-0860.5
NC_012668:2115228:2119984211998421210301047Vibrio cholerae MJ-1236 chromosome 1, complete sequenceABC transporter periplasmic spermidine putrescine-binding protein PotD3e-0860.1
NC_016944:1504888:1520069152006915211001032Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine transport system substrate-binding protein3e-0859.7
NC_016445:984856:1000036100003610010671032Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein3e-0859.7
NC_004461:779000:7919067919067929791074Staphylococcus epidermidis ATCC 12228, complete genomepotD protein1e-0757.8
NC_010498:1995500:2023681202368120247271047Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein2e-0757
NC_012691:2146473:2146473214647321477621290Tolumonas auensis DSM 9187, complete genomeputative spermidine/putrescine transport system substrate-binding protein5e-0755.8
NC_007929:111092:1330981330981341831086Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSpermidine/putrescine-binding protein6e-0755.5
NC_011894:79282:1062691062691075521284Methylobacterium nodulans ORS 2060, complete genomeABC transporter substrate-binding protein7e-0755.1
NC_013716:1298932:1302979130297913040251047Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, substrate-binding protein1e-0654.7
NC_004129:3123000:3128254312825431293421089Pseudomonas fluorescens Pf-5, complete genomeputrescine ABC transporter, periplasmic putrescine-binding protein1e-0654.3
NC_004129:3965947:3982527398252739836271101Pseudomonas fluorescens Pf-5, complete genomeputrescine ABC transporter, periplasmic putrescine-binding protein2e-0653.5