Pre_GI: BLASTP Hits

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Query: NC_016830:6589575:6612026 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 6612026, End: 6613426, Length: 1401

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:4549563:4568375456837545697511377Pseudomonas poae RE*1-1-14, complete genomemultidrug efflux protein NorA0641
NC_020829:5382500:5396209539620953975941386Pseudomonas denitrificans ATCC 13867, complete genomemultidrug efflux protein NorA9e-131467
NC_018080:6048516:6096416609641660978821467Pseudomonas aeruginosa DK2 chromosome, complete genomemultidrug efflux protein NorA5e-126451
NC_008027:2621443:2639312263931226407391428Pseudomonas entomophila L48, complete genomeNa+-driven multidrug efflux pump MatE3e-69263
NC_008836:2780339:2802823280282328042291407Burkholderia mallei NCTC 10229 chromosome II, complete sequencemultidrug efflux pump NorM2e-57223
NC_000911:2747604:2763867276386727652521386Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-46185
NC_017039:2745432:2761695276169527630801386Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein5e-46185
NC_017052:2745420:2761683276168327630681386Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein5e-46185
NC_017277:2746421:2762684276268427640691386Synechocystis sp. PCC 6803, complete genomehypothetical protein5e-46185
NC_009952:749426:7652297652297665991371Dinoroseobacter shibae DFL 12, complete genomeMATE efflux family protein2e-42173
NC_020911:1549065:1550919155091915522261308Octadecabacter antarcticus 307, complete genomemultidrug resistance protein NorM6e-38159
NC_005139:1784000:1785109178510917865601452Vibrio vulnificus YJ016 chromosome I, complete sequencemultidrug efflux protein NorA2e-36153
NC_013282:2026083:2066597206659720679701374Cronobacter turicensis, complete genomeMultidrug resistance protein mdtK5e-36152
NC_012526:157000:1612711612711626141344Deinococcus deserti VCD115, complete genomeputative multidrug resistance protein norM, Multidrug-efflux transporter1e-34148
NC_020260:1993344:1999315199931520006881374Cronobacter sakazakii Sp291, complete genomemultidrug efflux protein4e-34146
NC_009778:1956225:1962339196233919637121374Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-34146
NC_011149:1710601:1712649171264917140221374Salmonella enterica subsp. enterica serovar Agona str. SL483,multidrug resistance protein NorM5e-33142
NC_010102:1616530:1618578161857816199511374Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-33142
NC_016831:1236786:1267335126733512687081374Salmonella enterica subsp. enterica serovar Gallinarum/pullorummultidrug-efflux transporter6e-33142
NC_011294:1723852:1725900172590017272731374Salmonella enterica subsp. enterica serovar Enteritidis strmultidrug efflux protein6e-33142
NC_011274:1763676:1765724176572417670971374Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91multidrug efflux protein6e-33142
NC_011147:1502096:1504144150414415055171374Salmonella enterica subsp. enterica serovar Paratyphi A strmultidrug efflux protein6e-33142
NC_006511:1506915:1508963150896315103361374Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCmultidrug efflux protein NorA6e-33142
NC_011094:1435347:1465876146587614672491374Salmonella enterica subsp. enterica serovar Schwarzengrund strmultidrug efflux protein5e-33142
NC_011080:1470794:1501402150140215027751374Salmonella enterica subsp. enterica serovar Newport str. SL254,multidrug resistance protein NorM5e-33142
NC_010067:1507823:1513432151343215148051374Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-33142
NC_016863:1429516:1460129146012914615021374Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1multidrug efflux protein5e-33142
NC_016860:1469066:1499649149964915010221374Salmonella enterica subsp. enterica serovar Typhimurium strmultidrug efflux system protein5e-33142
NC_016856:1481325:1511938151193815133111374Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smultidrug efflux protein5e-33142
NC_012125:2360815:2362863236286323642361374Salmonella enterica subsp. enterica serovar Paratyphi C strainmultidrug efflux protein5e-33142
NC_011205:1852665:1854713185471318560861374Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853multidrug efflux protein5e-33142
NC_003198:1621347:1623395162339516247681374Salmonella enterica subsp. enterica serovar Typhi str. CT18,multidrug efflux protein NorA5e-33142
NC_003197:1471349:1501962150196215033351374Salmonella typhimurium LT2, complete genomemultidrug efflux protein NorA2e-32140
NC_014718:232832:2551352551352565321398Burkholderia rhizoxinica HKI 454 chromosome, complete genomeNa+ driven multidrug efflux pump2e-32140
NC_007498:2618131:2623969262396926253631395Pelobacter carbinolicus DSM 2380, complete genomeNa+-driven multidrug efflux pump6e-32139
NC_014752:1530000:1551758155175815531371380Neisseria lactamica ST-640, complete genometransmembrane efflux protein1e-31137
NC_020063:2077233:2099975209997521013481374Enterobacteriaceae bacterium strain FGI 57, complete genomeputative efflux protein, MATE family3e-31136
NC_008536:435221:4435784435784449151338Solibacter usitatus Ellin6076, complete genomeMATE efflux family protein2e-30133
NC_020126:9726992:9743591974359197450541464Myxococcus stipitatus DSM 14675, complete genomeputative multidrug resistance protein NorM1e-29131
NC_010939:405477:4424094424094438001392Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative multidrug resistance protein NorM1e-29131
NC_016632:830000:8341658341658355321368Serratia symbiotica str. 'Cinara cedri' chromosome, completemultidrug resistance protein, MATE family2e-29130
NC_010278:398521:4193544193544207451392Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,multidrug resistance protein5e-29129
NC_009053:393700:4146274146274160181392Actinobacillus pleuropneumoniae L20, complete genomeputative multidrug resistance protein NorM5e-29129
NC_013416:939668:9435589435589449551398Aggregatibacter actinomycetemcomitans D11S-1, complete genomemultidrug resistance protein MdtK (Multidrug-efflux transporter)6e-29129
NC_002488:2546495:2563236256323625646451410Xylella fastidiosa 9a5c, complete genomemultidrug efflux protein NorA6e-26119
NC_004578:2671508:2680315268031526816551341Pseudomonas syringae pv. tomato str. DC3000, complete genomemultidrug resistance protein NorM, putative2e-25117
NC_002973:1877905:1901813190181319031831371Listeria monocytogenes str. 4b F2365, complete genomemultidrug efflux protein NorA7e-25115
NC_008702:2259430:2265492226549222668831392Azoarcus sp. BH72, complete genomemultidrug resistance protein9e-25115
NC_004663:4928333:4946539494653949478971359Bacteroides thetaiotaomicron VPI-5482, complete genomeputative transport protein, multidrug efflux protein1e-24114
NC_013768:1983711:2007604200760420089951392Listeria monocytogenes 08-5923, complete genomemultidrug efflux protein2e-24114
NC_013891:1861294:1880643188064318820131371Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomemultidrug resistance protein, putative1e-23111
NC_004545:96422:1168611168611182161356Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomemultidrug resistance protein NorM3e-23110
NC_008555:1874878:1896395189639518977651371Listeria welshimeri serovar 6b str. SLCC5334, complete genomeMATE efflux family protein2e-23110
NC_009615:1601170:1603518160351816048641347Parabacteroides distasonis ATCC 8503 chromosome, complete genomemultidrug efflux transport protein3e-22107
NC_014722:1191380:1206060120606012074061347Burkholderia rhizoxinica HKI 454, complete genomeNa+ driven multidrug efflux pump6e-22105
NC_004116:1234712:1234712123471212360521341Streptococcus agalactiae 2603V/R, complete genomeMATE efflux family protein2e-21103
NC_015474:328500:3403903403903417811392Pyrococcus sp. NA2 chromosome, complete genomeDNA damage-inducible protein1e-1791.7
NC_015954:2405527:2405527240552724069781452Halophilic archaeon DL31 chromosome, complete genomeMATE efflux family protein1e-1687.8
NC_019897:3467618:3468591346859134699671377Thermobacillus composti KWC4 chromosome, complete genomeefflux protein, MATE family2e-1687.4
NC_005966:2699483:2699483269948327008231341Acinetobacter sp. ADP1, complete genomeputative multidrug resistance pump1e-1585.1
NC_012658:99899:99899998991012361338Clostridium botulinum Ba4 str. 657 chromosome, complete genomeMATE efflux family protein1e-1481.6
NC_012438:1564794:1578334157833415796591326Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomesodium-driven multidrug efflux pump protein3e-1480.5
NC_012654:18893:2562225622270071386Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequencemate efflux family protein4e-1479.7
NC_016935:7426389:7446133744613374475031371Paenibacillus mucilaginosus 3016 chromosome, complete genomeMATE efflux family protein1e-1378.2
NC_015690:7334786:7354044735404473554141371Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMATE efflux family protein1e-1378.2
NC_010718:2492895:2509927250992725113301404Natranaerobius thermophilus JW/NM-WN-LF, complete genomeMATE efflux family protein1e-1274.7
NC_014614:356746:3623293623293636961368Clostridium sticklandii, complete genomeMATE efflux family protein4e-1169.7
NC_012440:1080675:1096173109617310974771305Persephonella marina EX-H1, complete genomesodium-driven multidrug efflux pump protein4e-1169.7
NC_015954:2405527:2424324242432424257211398Halophilic archaeon DL31 chromosome, complete genomeMATE efflux family protein4e-1066.6
NC_016935:976059:9784369784369798271392Paenibacillus mucilaginosus 3016 chromosome, complete genomeMATE efflux family protein2e-0963.9
NC_015519:197836:2352942352942366761383Tepidanaerobacter sp. Re1 chromosome, complete genomeMATE efflux family protein3e-0963.5
NC_009922:944538:9660059660059674081404Alkaliphilus oremlandii OhILAs, complete genomeMATE efflux family protein7e-0962.4
NC_014377:480158:5245855245855259761392Thermosediminibacter oceani DSM 16646 chromosome, complete genomeMATE efflux family protein1e-0862
NC_014103:2635695:2650881265088126522751395Bacillus megaterium DSM319 chromosome, complete genomeMATE efflux family protein9e-0962
NC_003366:1013773:1027186102718610285021317Clostridium perfringens str. 13, complete genomehypothetical protein8e-0962
NC_014019:2661000:2671475267147526729021428Bacillus megaterium QM B1551 chromosome, complete genomeMATE efflux family protein8e-0962
NC_014732:141000:1419871419871434591473Halogeometricum borinquense DSM 11551 plasmid pHBOR04, completeefflux protein, MATE family1e-0861.6
NC_013967:1687825:1691338169133816928041467Haloferax volcanii DS2 chromosome, complete genomemulti antimicrobial extrusion family drug/sodium antiporter2e-0860.8
NC_012029:1525929:1548376154837615500401665Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeMATE efflux family protein3e-0860.5
NC_015737:1385585:1406049140604914074491401Clostridium sp. SY8519, complete genomehypothetical protein4e-0860.1
NC_019978:922978:9229789229789243481371Halobacteroides halobius DSM 5150, complete genomeputative efflux protein, MATE family4e-0860.1
NC_012914:469117:4957944957944971881395Paenibacillus sp. JDR-2, complete genomeMATE efflux family protein1e-0758.2
NC_019974:3760529:3780244378024437816441401Natronococcus occultus SP4, complete genomeputative efflux protein, MATE family2e-0757.8
NC_015578:2727684:2731914273191427332871374Treponema primitia ZAS-2 chromosome, complete genomeMATE efflux family protein2e-0757.8
NC_020063:2785652:2789029278902927903691341Enterobacteriaceae bacterium strain FGI 57, complete genomeputative efflux protein, MATE family4e-0756.6
NC_014387:1106901:1121574112157411229321359Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeMatE efflux family protein1e-0655.1
NC_015977:3011177:3018057301805730194181362Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-0655.1
NC_016631:2112175:2113886211388621153041419Granulicella mallensis MP5ACTX8 chromosome, complete genomeMATE efflux family protein2e-0654.7
NC_019962:1676632:1699026169902617005071482Natrinema pellirubrum DSM 15624, complete genomeputative efflux protein, MATE family3e-0653.9
NC_014500:3097362:3104536310453631059151380Dickeya dadantii 3937 chromosome, complete genomeNa+ driven multidrug efflux pump5e-0652.8