Pre_GI: BLASTP Hits

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Query: NC_016830:1901488:1909883 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1909883, End: 1910929, Length: 1047

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:1887275:1895604189560418966531050Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative chain length determinant protein1e-141503
NC_018080:1834754:1844025184402518450531029Pseudomonas aeruginosa DK2 chromosome, complete genomeO-antigen chain length regulator6e-71268
NC_009656:1994392:2003647200364720046961050Pseudomonas aeruginosa PA7 chromosome, complete genomeO-antigen chain length regulator2e-69263
NC_008463:2017607:2026846202684620279281083Pseudomonas aeruginosa UCBPP-PA14, complete genomeO-antigen chain length regulator9e-66250
NC_008027:1559083:1570238157023815712781041Pseudomonas entomophila L48, complete genomeO-antigen chain length regulator protein (Wzz)3e-62239
NC_011770:2046490:2055868205586820568691002Pseudomonas aeruginosa LESB58, complete genomeO-antigen chain length regulator1e-58227
NC_010322:1520973:1529343152934315303861044Pseudomonas putida GB-1 chromosome, complete genomelipopolysaccharide biosynthesis protein1e-56220
NC_020829:5174354:520016652001665201053888Pseudomonas denitrificans ATCC 13867, complete genomeO-antigen chain length regulator1e-51203
NC_014121:3399685:340348234034823404462981Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completechain length determinant protein7e-1375.1
NC_015740:2587323:2606365260636526075281164Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeputative chain length determinant protein9e-1271.2
NC_009436:2836847:283684728368472837845999Enterobacter sp. 638, complete genomelipopolysaccharide biosynthesis protein1e-1067.4
NC_011741:2155947:216070821607082161688981Escherichia coli IAI1 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-1067.4
CU928160:2155947:216070821607082161688981Escherichia coli IAI1 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-1067.4
NC_016514:3048883:305373930537393054719981Enterobacter cloacae EcWSU1 chromosome, complete genomechain length determinant protein2e-1067.4
NC_009801:2276131:2279985227998522810191035Escherichia coli E24377A, complete genomechain length determinant protein3e-1066.2
NC_011740:2135141:213514121351412136121981Escherichia fergusonii ATCC 35469, complete genomeChain length determinant protein (Polysaccharide antigen chain regulator)4e-1065.9
NC_011745:2302979:2306833230683323078671035Escherichia coli ED1a chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-0963.5
NC_011601:2211917:221586022158602216837978Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-0963.5
NC_020063:1659795:168299716829971683974978Enterobacteriaceae bacterium strain FGI 57, complete genomechain length determinant protein6e-0962
NC_013282:2827757:2832655283265528336651011Cronobacter turicensis, complete genomeChain length determinant protein7e-0962
NC_013361:2848949:285114628511462852123978Escherichia coli O26:H11 str. 11368 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-0861.2
NC_007613:864084:8668718668718679051035Shigella boydii Sb227, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-0861.2
NC_011748:2324495:232835023283502329330981Escherichia coli 55989, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains9e-0961.2
CU928145:2324495:232835023283502329330981Escherichia coli 55989 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains9e-0961.2
NC_010658:1090104:1113117111311711141511035Shigella boydii CDC 3083-94, complete genomechain length determinant protein1e-0860.8
NC_011742:2093503:209743220974322098409978Escherichia coli S88 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains1e-0860.8
NC_013716:2255102:226001822600182261004987Citrobacter rodentium ICC168, complete genomechain length determinant protein2e-0860.1
AC_000091:2096672:209945820994582100438981Escherichia coli W3110 DNA, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-0859.7
NC_000913:2092559:209534520953452096325981Escherichia coli K12, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-0859.7
NC_010473:2183567:218635321863532187333981Escherichia coli str. K-12 substr. DH10B, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-0859.7
NC_012759:1983975:198782819878281988808981Escherichia coli BW2952 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-0859.7
AP010958:2504072:250792525079252508902978Escherichia coli O103:H2 str. 12009 DNA, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-0859.7
NC_013353:2504072:250792525079252508902978Escherichia coli O103:H2 str. 12009, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-0859.7
NC_012691:2225000:2243045224304522441631119Tolumonas auensis DSM 9187, complete genomelipopolysaccharide biosynthesis protein3e-0859.7
NC_012947:1720732:174570417457041746684981Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelipopolysaccharide biosynthesis protein6e-0858.9
NC_008253:2134110:213567721356772136654978Escherichia coli 536, complete genomechain length determinant protein7e-0858.5
NC_004431:2383901:2385469238546923864821014Escherichia coli CFT073, complete genomeChain length determinant protein7e-0858.5
NC_007946:2231872:2235818223581822368311014Escherichia coli UTI89, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains7e-0858.5
NC_012967:2025127:202732320273232028306984Escherichia coli B str. REL606 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains6e-0858.5
NC_020260:1184174:120322312032231204215993Cronobacter sakazakii Sp291, complete genomechain length determinant protein WzzB9e-0858.2
NC_009778:1141716:1161724116172411627341011Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0757.8
NC_011415:2346474:235139523513952352372978Escherichia coli SE11 chromosome, complete genomeO-antigen chain length determinant protein1e-0757.8
NC_010468:1775000:179707217970721798052981Escherichia coli ATCC 8739, complete genomelipopolysaccharide biosynthesis protein1e-0757.8
NC_010498:1035406:105479910547991055779981Escherichia coli SMS-3-5, complete genomechain length determinant protein2e-0757
NC_011750:1034919:105902410590241060004981Escherichia coli IAI39 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-0757
NC_017328:2153083:2158096215809621591091014Shigella flexneri 2002017 chromosome, complete genomeChain length determinant protein2e-0756.6
NC_004741:2081649:2086662208666220876751014Shigella flexneri 2a str. 2457T, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-0756.6
NC_004337:2098736:2103749210374921047621014Shigella flexneri 2a str. 301, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-0756.6
NC_008258:2100646:2105659210565921066721014Shigella flexneri 5 str. 8401, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-0756.6
NC_008563:2182270:2186123218612321871391017Escherichia coli APEC O1, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains2e-0756.6
NC_011751:2395882:239982223998222400802981Escherichia coli UMN026 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains3e-0756.2
NC_011353:2734222:273422227342222735199978Escherichia coli O157:H7 str. EC4115 chromosome, complete genomechain length determinant protein4e-0755.8
NC_013008:2733203:273320327332032734180978Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains4e-0755.8
NC_002695:2769387:276938727693872770367981Escherichia coli O157:H7 str. Sakai, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains5e-0755.5
NC_002655:2839600:2839600283960028406131014Escherichia coli O157:H7 EDL933, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains6e-0755.5
NC_006300:600516:6071416071416083311191Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein7e-0755.1
NC_007606:1999870:2018463201846320194971035Shigella dysenteriae Sd197, complete genomeregulator of length of O-antigen component of lipopolysaccharide chains8e-0755.1
NC_013941:2544569:2549493254949325505301038Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeO-antigen chain length determinant Wzz9e-0754.7