Pre_GI: BLASTP Hits

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Query: NC_016822:267758:288418 Shigella sonnei 53G, complete genome

Start: 288418, End: 289188, Length: 771

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007384:278810:289566289566290336771Shigella sonnei Ss046, complete genomeputative amidase-type enzyme5e-151533
NC_002655:261236:277488277488278258771Escherichia coli O157:H7 EDL933, complete genomeputative EC 3.5. amidase-type enzyme6e-149526
NC_002695:261235:277487277487278257771Escherichia coli O157:H7 str. Sakai, complete genomeputative amidase-type enzyme6e-149526
NC_007946:258747:271918271918272697780Escherichia coli UTI89, complete genomehypothetical protein2e-148525
NC_011742:258746:271917271917272687771Escherichia coli S88 chromosome, complete genomehypothetical protein2e-148524
NC_008253:257059:271243271243272013771Escherichia coli 536, complete genomepossible hydrolase2e-148524
NC_008563:258725:271896271896272666771Escherichia coli APEC O1, complete genomeputative C-N hydrolase family amidase, NAD(P)-binding2e-148524
NC_011745:258727:273816273816274586771Escherichia coli ED1a chromosome, complete genomehypothetical protein9e-148522
CU928160:256932:277869277869278639771Escherichia coli IAI1 chromosome, complete genomeputative C-N hydrolase family amidase1e-147521
NC_011741:256932:277869277869278639771Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-147521
NC_011751:256830:274134274134274904771Escherichia coli UMN026 chromosome, complete genomehypothetical protein9e-147519
NC_011294:311796:331200331200331967768Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-125449
NC_011080:333121:356174356174356941768Salmonella enterica subsp. enterica serovar Newport str. SL254,hydrolase YafV6e-126449
NC_010102:2762304:276485727648572765624768Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-126449
NC_006511:2540500:254393725439372544704768Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible hydrolase6e-126449
NC_003197:332086:351721351721352488768Salmonella typhimurium LT2, complete genomeputative amidohydrolase6e-126449
NC_011083:338910:359679359679360446768Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hydrolase YafV6e-126449
NC_011149:309556:334317334317335084768Salmonella enterica subsp. enterica serovar Agona str. SL483,hydrolase YafV6e-126449
NC_011147:2536000:253947325394732540240768Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein6e-126449
NC_016810:329849:351199351199351966768Salmonella enterica subsp. enterica serovar Typhimurium strhydrolase6e-126449
NC_016831:2667561:267191226719122672679768Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative hydrolase6e-126449
NC_016856:332771:352406352406353173768Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-126449
NC_016857:329849:351199351199351966768Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hydrolase yafV6e-126449
NC_016860:332087:351722351722352489768Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-126449
NC_016863:332060:351695351695352462768Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-126449
NC_017046:329847:351197351197351964768Salmonella enterica subsp. enterica serovar Typhimurium str. 798hydrolase6e-126449
NC_012125:326909:346193346193346951759Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-125447
NC_004631:2615908:261927926192792620046768Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible hydrolase9e-125446
NC_016832:2612809:261618026161802616947768Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Hydrolase9e-125446
NC_017187:641822:656395656395657177783Arcobacter butzleri ED-1, complete genomenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase8e-33140
NC_007575:601256:610081610081610863783Sulfurimonas denitrificans DSM 1251, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase3e-32139
NC_007498:134442:136086136086136898813Pelobacter carbinolicus DSM 2380, complete genomeputative amidase1e-24113
NC_013740:1218429:122821612282161228980765Acidaminococcus fermentans DSM 20731, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase8e-23107
NC_002976:1540794:155681215568121557606795Staphylococcus epidermidis RP62A, complete genomehydrolase, carbon-nitrogen family1e-22107
NC_014008:1463795:146379514637951464586792Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase6e-22104
NC_020164:887510:890489890489891274786Staphylococcus warneri SG1, complete genomehypothetical protein6e-22104
NC_014011:472650:485997485997486788792Aminobacterium colombiense DSM 12261 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase3e-2098.6
NC_015499:309394:331603331603332370768Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase1e-1996.7
NC_015320:1260344:127775212777521278501750Archaeoglobus veneficus SNP6 chromosome, complete genomenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase2e-1789.4
NC_008942:1446682:146317314631731463919747Methanocorpusculum labreanum Z, complete genomeUDP-glucose pyrophosphorylase-like protein4e-1788.6
NC_012522:2931910:294911829491182949954837Rhodococcus opacus B4, complete genomeputative hydrolase8e-1787.4
NC_014729:385500:402826402826403620795Halogeometricum borinquense DSM 11551 chromosome, complete genomeamidohydrolase9e-1787.4
NC_015379:6226661:625663562566356257429795Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative hydrolase8e-1684.3
NC_015733:443122:445580445580446374795Pseudomonas putida S16 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase1e-1583.6
NC_009512:469000:471561471561472355795Pseudomonas putida F1, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase2e-1583.2
NC_008027:3844355:386103238610323861847816Pseudomonas entomophila L48, complete genomecarbon-nitrogen hydrolase6e-1581.3
NC_017221:1222963:124367312436731244077405Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein9e-1580.9
NC_014616:1065500:106853910685391069411873Bifidobacterium bifidum S17 chromosome, complete genomecarbon-nitrogen hydrolase2e-1479.3
NC_015222:2136657:216245421624542163284831Nitrosomonas sp. AL212 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase5e-1478.2
NC_014328:2326930:232927423292742330107834Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative hydrolase6e-1477.8
NC_002947:4362271:436936943693694370184816Pseudomonas putida KT2440, complete genomecarbon-nitrogen hydrolase family protein8e-1477.4
NC_014638:1043854:104681410468141047686873Bifidobacterium bifidum PRL2010 chromosome, complete genomehydrolase, carbon-nitrogen family1e-1376.6
NC_009511:2726296:274170227417022742508807Sphingomonas wittichii RW1 chromosome, complete genomenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase2e-1375.9
NC_015633:2919501:293867929386792939512834Vibrio anguillarum 775 chromosome chromosome I, complete sequencecarbon-nitrogen hydrolase family protein2e-1375.9
NC_013501:1547508:156351515635151564321807Rhodothermus marinus DSM 4252, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase5e-1374.7
NC_013894:672840:702271702271703008738Thermocrinis albus DSM 14484 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase7e-1374.3
NC_008767:1739344:175416817541681754980813Neisseria meningitidis FAM18, complete genomehypothetical protein7e-1374.3
NC_015185:792933:797736797736798494759Desulfurobacterium thermolithotrophum DSM 11699 chromosome,Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase1e-1273.6
NC_015276:1947936:196501919650191965840822Marinomonas mediterranea MMB-1 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase4e-1272
NC_011653:1339868:135032013503201351114795Thermosipho africanus TCF52B, complete genomenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase4e-1272
NC_009663:2478311:249395824939582494692735Sulfurovum sp. NBC37-1, complete genomehydrolase7e-1271.2
NC_016943:1356419:135724613572461357827582Blastococcus saxobsidens DD2, complete genomeputative amidase9e-1270.9
NC_013961:3709800:371873937187393719599861Erwinia amylovora, complete genomehydrolase, carbon-nitrogen family1e-1170.5
NC_013971:3713000:371899737189973719857861Erwinia amylovora ATCC 49946 chromosome, complete genomecarbon-nitrogen hydrolase1e-1170.5
NC_012214:3931824:393934139393413940201861Erwinia pyrifoliae Ep1/96, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase2e-1169.7
NC_014103:2635695:263758126375812638375795Bacillus megaterium DSM319 chromosome, complete genomecarbon-nitrogen family hydrolase2e-1169.3
NC_009928:23424:513345133452143810Acaryochloris marina MBIC11017 plasmid pREB3, complete sequencecarbon-nitrogen hydrolase family protein4e-1168.6
NC_014019:2661000:266121626612162661986771Bacillus megaterium QM B1551 chromosome, complete genomecarbon-nitrogen hydrolase7e-1167.8
NC_012668:160357:188667188667189494828Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein9e-1167.4
NC_014103:2635695:263989026398902640660771Bacillus megaterium DSM319 chromosome, complete genomecarbon-nitrogen hydrolase8e-1167.4
NC_007677:1872459:188350818835081884353846Salinibacter ruber DSM 13855, complete genomehydrolase, carbon-nitrogen family1e-1067
NC_015145:1045264:104912510491251049904780Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeamidohydrolase1e-1066.6
NC_016932:2007001:204229120422912043127837Corynebacterium pseudotuberculosis 316 chromosome, complete genomehydrolase4e-1065.5
NC_007712:1893066:189306618930661893881816Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-1064.7
NC_017301:2025978:206199120619912062827837Corynebacterium pseudotuberculosis C231 chromosome, completehypothetical protein1e-0963.5
NC_014329:2036812:207163520716352072366732Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-0963.5
NC_019673:7598026:762067476206747621447774Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0963.2
NC_014330:1541874:154234415423441543141798Brachyspira pilosicoli 95/1000 chromosome, complete genomecarbon nitrogen hydrolase family protein2e-0962.8
NC_018607:2578433:259482625948262595623798Brachyspira pilosicoli B2904 chromosome, complete genomecarbon nitrogen hydrolase family protein2e-0962.8
NC_008596:3404832:342331134233113424108798Mycobacterium smegmatis str. MC2 155, complete genomenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase4e-0962
NC_015683:2279904:231267123126712313498828Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein5e-0961.6
NC_014158:1479313:148248414824841483299816Tsukamurella paurometabola DSM 20162 chromosome, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase5e-0961.6
NC_009922:944538:956754956754957641888Alkaliphilus oremlandii OhILAs, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase4e-0961.6
NC_008254:102465:106211106211107029819Mesorhizobium sp. BNC1, complete genomeNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase1e-0860.5
NC_017317:2181284:221703222170322217859828Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein1e-0860.1
NC_016051:241438:242561242561243352792Thermococcus sp. AM4 chromosome, complete genomealiphatic amidase2e-0860.1
NC_007494:739403:767805767805768647843Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencePredicted amidohydrolase3e-0858.9
NC_009050:427000:451170451170452012843Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase4e-0858.5
NC_010410:3166279:318075731807573181581825Acinetobacter baumannii AYE, complete genomehypothetical protein1e-0756.6
NC_010611:679862:682916682916683740825Acinetobacter baumannii ACICU, complete genomepredicted amidohydrolase1e-0756.6
NC_018870:484000:484548484548485381834Thermacetogenium phaeum DSM 12270 chromosome, complete genomeomega-amidase Nit2e-0756.6
NC_017080:166180:168547168547169497951Phycisphaera mikurensis NBRC 102666, complete genomeputative hydrolase4e-0755.5
NC_016645:279232:300053300053300868816Pyrobaculum sp. 1860 chromosome, complete genomenitrilase7e-0754.7
NC_010125:1:177451774518575831Gluconacetobacter diazotrophicus PAl 5, complete genomeNitrilase/cyanide hydratase8e-0754.3
NC_016070:1340500:135527013552701356004735Thermoproteus tenax Kra 1, complete genomeputative amidohydrolase7e-0754.3
NC_013216:2078444:2139991213999121417031713Desulfotomaculum acetoxidans DSM 771, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase1e-0653.9
NC_008599:29000:310193101931681663Campylobacter fetus subsp. fetus 82-40, complete genomenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase1e-0653.5
NC_013740:571879:589162589162589989828Acidaminococcus fermentans DSM 20731, complete genomeNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase2e-0652.8
NC_016626:400080:400080400080400898819Burkholderia sp. YI23 plasmid byi_1p, complete sequencenitrilase/cyanide hydratase and apolipoprotein N-acyltransferase8e-0651.2