Pre_GI Gene

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Host: NC_003197 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003197:332086 Salmonella typhimurium LT2, complete genome

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
332086332532447putative cytoplasmic proteinQuickGO ontologyBLASTP
3325513366454095putative RHS-like proteinQuickGO ontologyBLASTP
337095337835741putative RHS-like proteinQuickGO ontologyBLASTP
337829338275447putative cytoplasmic proteinQuickGO ontologyBLASTP
338838339275438putative cytoplasmic proteinQuickGO ontologyBLASTP
339328339603276hypothetical proteinBLASTP
340044340352309putative cytoplasmic proteinQuickGO ontologyBLASTP
340755340952198putative transposaseQuickGO ontologyBLASTP
342209342721513putative outer membrane proteinQuickGO ontologyBLASTP
342829343542714putative fimbrial assembly chaparoneQuickGO ontologyBLASTP
3435663460762511putative fimbrial usherQuickGO ontologyBLASTP
346098346568471putative fimbrial subunitQuickGO ontologyBLASTP
346974347795822putative xylanasechitin deacetylaseQuickGO ontologyBLASTP
348610349557948transcriptional regulatorQuickGO ontologyBLASTP
349674349889216putative cytoplasmic proteinQuickGO ontologyBLASTP
349893350612720SapA-like proteinQuickGO ontologyBLASTP
350943351350408VirG-like proteinQuickGO ontologyBLASTP
351721352488768putative amidohydrolaseQuickGO ontologyBLASTP
3525973550412445acyl-CoA dehydrogenaseQuickGO ontologyBLASTP