Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:2536000 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25361022536680579phosphoheptose isomeraseQuickGO ontologyBLASTP
253692025393642445acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
25394732540240768hypothetical proteinBLASTP
25406112541018408hypothetical proteinBLASTP
25413492542068720outer membrane adhesinQuickGO ontologyBLASTP
25420722542200129hypothetical proteinBLASTP
25423732542567195hypothetical protein
25437882544243456transcriptional regulatorQuickGO ontologyBLASTP
254437625454551080fimbrial proteinQuickGO ontologyBLASTP
254547825481652688outermembrane fimbrial usher proteinQuickGO ontologyBLASTP
25482742548849576fimbrial subunitQuickGO ontologyBLASTP
25489002549610711fimbrial proteinQuickGO ontologyBLASTP
25512612551428168hypothetical proteinBLASTP
25515032551628126hypothetical proteinBLASTP
25517482552692945LysR family transcriptional regulatorQuickGO ontologyBLASTP
25535122554333822ybeJ-like proteinQuickGO ontologyBLASTP
255523325577432511outer-membrane fimbrial usher proteinQuickGO ontologyBLASTP
25577672558507741periplasmic fimbrial chaperone proteinQuickGO ontologyBLASTP