Pre_GI: BLASTP Hits

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Query: NC_016445:2663837:2678186 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2678186, End: 2678980, Length: 795

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:238580:252929252929253723795Vibrio cholerae IEC224 chromosome I, complete sequencelipopolysaccharide/O-antigen transport protein2e-135481
NC_012668:368305:385274385274386068795Vibrio cholerae MJ-1236 chromosome 1, complete sequenceO-antigen export system permease protein2e-135481
NC_012582:272320:286669286669287463795Vibrio cholerae O395 chromosome chromosome I, complete sequencelipopolysaccharide/O-antigen transport protein2e-135481
NC_012578:224559:238906238906239700795Vibrio cholerae M66-2 chromosome I, complete sequencelipopolysaccharide/O-antigen transport protein2e-135481
NC_009457:2764972:277932127793212780115795Vibrio cholerae O395 chromosome 2, complete sequencelipopolysaccharide/O-antigen transport protein2e-135481
NC_002505:238569:252918252918253712795Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completelipopolysaccharide/O-antigen transport protein2e-135481
NC_017270:220282:235932235932236705774Vibrio cholerae LMA3984-4 chromosome chromosome I, completeO-antigen export system, permease protein2e-130464
NC_008390:818571:823749823749824531783Burkholderia cepacia AMMD chromosome 1, complete sequenceABC-2 type transporter5e-23108
NC_009667:2860818:287482728748272875678852Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceABC-2 type transporter2e-22106
NC_013592:713036:727786727786728637852Dickeya dadantii Ech586, complete genomeABC-2 type transporter1e-22106
NC_016818:633750:659825659825660673849Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeABC-type polysaccharide/polyol phosphate export systems permease2e-22105
NC_012880:3125261:314040631404063141209804Dickeya dadantii Ech703, complete genomeABC-2 type transporter3e-22105
NC_011071:572346:575009575009575869861Stenotrophomonas maltophilia R551-3, complete genomeABC-2 type transporter3e-22105
NC_010676:3009980:302826630282663029045780Burkholderia phytofirmans PsJN chromosome 2, complete sequenceABC-2 type transporter5e-22104
NC_014837:2803447:281318628131862813986801Pantoea sp. At-9b chromosome, complete genomeABC-2 type transporter2e-21103
NC_010508:933862:939401939401940183783Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceABC-2 type transporter3e-21102
NC_007404:1964935:197525419752541976069816Thiobacillus denitrificans ATCC 25259, complete genomeABC transporter permease protein2e-1996.3
NC_016787:135677:139456139456140361906Corynebacterium diphtheriae HC03 chromosome, complete genomeO-antigen export system permease RfbA4e-1995.1
NC_016799:167362:167362167362168267906Corynebacterium diphtheriae 31A chromosome, complete genomeO-antigen export system permease RfbA5e-1994.7
NC_012791:821371:840479840479841282804Variovorax paradoxus S110 chromosome 1, complete genomeABC-2 type transporter7e-1994.4
NC_014500:4257145:426810942681094268897789Dickeya dadantii 3937 chromosome, complete genomeO-antigen export system permease RfbD9e-1994
NC_011147:2085241:209762320976232098393771Salmonella enterica subsp. enterica serovar Paratyphi A strpolysaccharide export ABC transporter permease1e-1893.6
NC_003197:776238:787336787336788106771Salmonella typhimurium LT2, complete genomeputative ABC transporter permease protein1e-1893.6
NC_010102:2322866:233598123359812336751771Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1893.6
NC_011080:780850:791947791947792717771Salmonella enterica subsp. enterica serovar Newport str. SL254,O-antigen export system, permease protein1e-1893.6
NC_011083:824659:835745835745836515771Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,O-antigen export system, permease protein1e-1893.6
NC_016810:775649:786747786747787517771Salmonella enterica subsp. enterica serovar Typhimurium strO-antigen export system, permease protein1e-1893.6
NC_016856:776735:787833787833788603771Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SABC transporter permease1e-1893.6
NC_016857:775649:786747786747787517771Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74ABC transporter permease1e-1893.6
NC_016860:816000:826166826166826936771Salmonella enterica subsp. enterica serovar Typhimurium strO-antigen ABC transporter permease protein1e-1893.6
NC_016863:776734:787832787832788602771Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ABC transporter permease1e-1893.6
NC_017046:775636:786733786733787503771Salmonella enterica subsp. enterica serovar Typhimurium str. 798O-antigen export system, permease protein1e-1893.6
NC_009446:351042:366787366787367674888Dichelobacter nodosus VCS1703A, complete genomeABC-2 type transporter family protein1e-1893.6
NC_011094:842038:853136853136853906771Salmonella enterica subsp. enterica serovar Schwarzengrund strO-antigen export system, permease2e-1893.2
NC_014816:2446236:247112924711292471926798Asticcacaulis excentricus CB 48 chromosome 1, complete sequence4e-1891.7
NC_003198:751779:762594762594763364771Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-1787.8
NC_011985:3892630:391433139143313915167837Agrobacterium radiobacter K84 chromosome 1, complete genomeglycosyl transferase2e-1686.3
NC_012704:2347969:236731123673112368270960Corynebacterium kroppenstedtii DSM 44385, complete genomeABC-type transport system, permease protein8e-1684.3
NC_012522:4299287:430019643001964301068873Rhodococcus opacus B4, complete genomeputative ABC transporter permease protein2e-1583.2
NC_007492:4563981:458794445879444588741798Pseudomonas fluorescens PfO-1, complete genomeABC-22e-1582.8
NC_013093:125363:144188144188145099912Actinosynnema mirum DSM 43827, complete genomeABC-2 type transporter2e-1479.3
NC_014722:2260489:227124622712462271899654Burkholderia rhizoxinica HKI 454, complete genomepolysaccharide export ABC transporter permease protein3e-1479
NC_013159:148180:163178163178164068891Saccharomonospora viridis DSM 43017, complete genomeABC-type polysaccharide/polyol phosphate export systems, permease component4e-1478.6
NC_011528:1492000:149462714946271495490864Coxiella burnetii CbuK_Q154, complete genomeO-antigen export system permease protein6e-1374.7
NC_011527:1255998:125786612578661258729864Coxiella burnetii CbuG_Q212, complete genomeO-antigen export system permease protein6e-1271.2
NC_009445:5388822:538882253888225389664843Bradyrhizobium sp. ORS 278 chromosome, complete genomeO-antigene/LPS export system permease8e-1270.9
NC_004310:508483:518999518999519781783Brucella suis 1330 chromosome I, complete sequenceO-antigen export system permease protein RfbD4e-0962
NC_010169:527500:536987536987537769783Brucella suis ATCC 23445 chromosome I, complete sequenceO-antigen export system permease protein rfbD4e-0962
NC_010103:507482:517642517642518424783Brucella canis ATCC 23365 chromosome I, complete sequenceO-antigen export system permease protein rfbD4e-0962
NC_012441:529500:539107539107539889783Brucella melitensis ATCC 23457 chromosome I, complete sequenceO-antigen export system permease rfbD4e-0962
NC_013119:511500:521124521124521906783Brucella microti CCM 4915 chromosome 1, complete sequenceO-antigen export system permease protein RfbD4e-0962
NC_016797:508414:518930518930519712783Brucella suis VBI22 chromosome I, complete sequenceO-antigen export system permease protein RfbD4e-0962
NC_017248:529500:539153539153539935783Brucella melitensis NI chromosome chromosome I, complete sequencehypothetical protein4e-0962
NC_017251:508469:518985518985519767783Brucella suis 1330 chromosome I, complete genomeO-antigen export system permease protein RfbD4e-0962
NC_006932:531000:540621540621541403783Brucella abortus biovar 1 str. 9-941 chromosome I, completeRfbD, O-antigen export system permease protein5e-0961.6
NC_007618:526400:536916536916537698783Brucella melitensis biovar Abortus 2308 chromosome I, completeABC transporter, family 2:Acriflavin resistance protein5e-0961.6
NC_010742:529500:538937538937539734798Brucella abortus S19 chromosome 1, complete sequenceO-antigen export system permease protein RFBD5e-0961.6
NC_003317:1443874:146324814632481464045798Brucella melitensis 16M chromosome I, complete sequenceO-ANTIGEN EXPORT SYSTEM PERMEASE PROTEIN RFBD5e-0961.6
NC_009505:531000:540620540620541417798Brucella ovis ATCC 25840 chromosome I, complete sequencehypothetical protein5e-0961.6
NC_015857:531314:541299541299542081783Brucella pinnipedialis B2/94 chromosome chromosome 1, completeO-antigen export system permease RfbD9e-0960.8
NC_015578:1633393:165394816539481654724777Treponema primitia ZAS-2 chromosome, complete genomeO-antigen export system permease RfbA6e-0754.7
NC_009454:2663539:268232226823222683101780Pelotomaculum thermopropionicum SI, complete genomeABC-type polysaccharide/polyol phosphate export systems, permease component9e-0754.3
NC_015458:3328905:333856633385663339363798Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein1e-0653.9
NC_010694:1502019:151377315137731514540768Erwinia tasmaniensis, complete genomeO-antigen ABC transporter permease2e-0653.1
NC_014387:177308:193380193380194162783Butyrivibrio proteoclasticus B316 chromosome 1, complete genomepolysaccharide ABC transporter permease4e-0652
NC_012913:626449:632965632965633753789Aggregatibacter aphrophilus NJ8700, complete genomeABC transporter integral membrane subunit5e-0652
NC_002977:652481:662275662275663102828Methylococcus capsulatus str. Bath, complete genomecarbohydrate ABC-transporter, permease protein, putative7e-0651.2