Pre_GI: BLASTP Hits

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Query: NC_016047:3406488:3421249 Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete

Start: 3421249, End: 3421920, Length: 672

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system. The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014479:3245126:326349132634913264162672Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease1e-109395
NC_016047:3406488:342553434255343426202669Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeglycine betaine/carnitine/choline transport system permease OpuCD2e-92338
NC_014479:3245126:326906732690673269741675Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeglycine betaine/carnitine/choline/choline sulfate ABC transporter permease1e-91335
NC_011999:1567818:158473315847331585425693Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein2e-64244
NC_004461:205068:215313215313215960648Staphylococcus epidermidis ATCC 12228, complete genomeopuCD protein1e-44179
NC_009328:293000:312108312108312737630Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease9e-39160
NC_014915:308056:325858325858326487630Geobacillus sp. Y412MC52 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component8e-39160
NC_013411:1168049:118585111858511186480630Geobacillus sp. Y412MC61, complete genomebinding-protein-dependent transport systems inner membrane component8e-39160
NC_014209:1580423:159879915987991599437639Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component2e-38159
NC_016593:353505:379641379641380270630Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completebinding-protein-dependent transport system inner membrane component2e-38159
NC_006510:310212:341910341910342539630Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-38159
NC_013406:5066769:510984751098475110548702Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-38157
NC_014377:210888:220474220474221115642Thermosediminibacter oceani DSM 16646 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-37155
NC_009727:1899876:1899876189987619014561581Coxiella burnetii Dugway 7E9-12, complete genomeABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein1e-36152
NC_011999:1567818:158318915831891583833645Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein1e-33143
NC_015425:2528549:2560000256000025615861587Clostridium botulinum BKT015925 chromosome, complete genomeputative glycine betaine/carnitine/choline ABC transporter8e-34143
NC_016047:3406488:342286934228693423522654Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBB3e-33141
NC_014206:345499:376734376734377363630Geobacillus sp. C56-T3 chromosome, complete genomebinding-protein-dependent transporters inner membrane component4e-33141
NC_014479:3245126:326511132651113265764654Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease9e-33140
NC_016023:1143130:1143130114313011446591530Bacillus coagulans 36D1 chromosome, complete genomeglycine betaine ABC transporter periplasmic protein2e-31135
NC_015589:3241364:324228832422883242905618Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-31135
NC_013520:1905554:1927618192761819291501533Veillonella parvula DSM 2008, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system4e-30131
NC_009495:1759759:1776428177642817780141587Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease/substrate-binding protein2e-29129
NC_004461:205068:213697213697214332636Staphylococcus epidermidis ATCC 12228, complete genomeopuCB protein2e-27122
NC_008525:270310:2858552858552873841530Pediococcus pentosaceus ATCC 25745, complete genomeABC-type proline/glycine betaine transport system, permease and substrate binding protein6e-27120
NC_014614:6115:392333923339889657Clostridium sticklandii, complete genomeGlycine betaine transport system permease protein / Glycine betaine-binding protein (fragment)1e-26119
NC_007576:1854136:1854136185413618556621527Lactobacillus sakei subsp. sakei 23K, complete genomePutative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits3e-26118
NC_014315:2711852:2731698273169827332031506Nitrosococcus watsoni C-113 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein8e-26117
NC_016626:400080:403660403660404385726Burkholderia sp. YI23 plasmid byi_1p, complete sequencebinding-protein-dependent transport system inner membrane protein5e-26117
NC_010718:128423:141500141500142150651Natranaerobius thermophilus JW/NM-WN-LF, complete genomebinding-protein-dependent transport systems inner membrane component5e-26117
NC_016605:50695:6941669416709451530Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesubstrate binding domain of ABC-type glycine betaine transport system family protein5e-26117
NC_014121:2247913:226354522635452264255711Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system permease protein1e-24113
NC_021175:881845:8818458818458833651521Streptococcus oligofermentans AS 1.3089, complete genomecholine ABC transporter permease2e-24112
NC_013406:5066769:510821851082185108883666Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component5e-23107
NC_012883:1695703:169570316957031696320618Thermococcus sibiricus MM 739, complete genomeOsmoprotection protein (proW-1)2e-22105
NC_010718:128423:143328143328144173846Natranaerobius thermophilus JW/NM-WN-LF, complete genomebinding-protein-dependent transport systems inner membrane component2e-22105
NC_018515:4196409:422204142220414222697657Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeproline/glycine betaine ABC transporter permease1e-21103
NC_007963:2644930:264611626461162646847732Chromohalobacter salexigens DSM 3043, complete genomebinding-protein-dependent transport systems inner membrane component6e-21100
NC_014121:2247913:226518222651822265829648Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system permease protein4e-2098.2
NC_011832:1399446:139883913988391399453615Candidatus Methanosphaerula palustris E1-9c, complete genomebinding-protein-dependent transport systems inner membrane component2e-1995.9
NC_008148:583030:608239608239608946708Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component3e-1995.5
NC_018515:4196409:422021942202194220863645Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeproline/glycine betaine ABC transporter permease2e-1892.8
NC_012526:4462:2070020700218811182Deinococcus deserti VCD115, complete genomeputative proline/glycine betaine2e-1892.4
NC_015589:3241364:324292832429283243569642Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-1892
NC_009778:1070000:1070004107000410711371134Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1788.6
NC_020260:1111130:1112092111209211132251134Cronobacter sakazakii Sp291, complete genomeosmoprotectant uptake system permease YehY3e-1788.6
NC_016626:400080:401837401837402541705Burkholderia sp. YI23 plasmid byi_1p, complete sequencebinding-protein-dependent transport system inner membrane protein1e-1686.7
NC_009792:2688747:271069327106932711316624Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1685.5
NC_015733:2581324:2584695258469525866471953Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component4e-1684.7
NC_015278:538500:5586705586705602111542Aerococcus urinae ACS-120-V-Col10a chromosome, complete genometoxin-antitoxin system toxin component, PIN family5e-1684.7
NC_008687:965152:989964989964990845882Paracoccus denitrificans PD1222 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component8e-1684
NC_012883:1695703:169630716963071696936630Thermococcus sibiricus MM 739, complete genomeOsmoprotection protein (proW-2)7e-1684
NC_009792:2688747:271131327113132711945633Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-1683.6
NC_009512:1025365:102536510253651026078714Pseudomonas putida F1, complete genomebinding-protein-dependent transport systems inner membrane component1e-1583.6
NC_020260:1111130:111415211141521114883732Cronobacter sakazakii Sp291, complete genomeosmoprotectant uptake system permease YehW6e-1580.9
NC_010002:2933909:2935066293506629362651200Delftia acidovorans SPH-1, complete genomebinding-protein-dependent transport systems inner membrane component6e-1580.9
NC_008148:1567703:157570915757091576575867Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component1e-1480.1
NC_015733:2581324:262021326202132621145933Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-1479.7
NC_009778:1070000:107206410720641072795732Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1479.7
NC_008343:88184:942259422595076852Granulibacter bethesdensis CGDNIH1, complete genomeglycine betaine/L-proline transport system permease protein proW1e-1479.7
NC_014923:79370:856258562586512888Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completebinding-protein-dependent transport systems inner membrane component5e-1477.8
NC_009925:647752:652404652404653033630Acaryochloris marina MBIC11017, complete genomebinding-protein-dependent inner membrane transport system, putative8e-1477.4
NC_019978:2036779:205052220505222051355834Halobacteroides halobius DSM 5150, complete genomeABC-type proline/glycine betaine transport system, permease component1e-1376.6
NC_018643:857911:8579118579118600642154Alpha proteobacterium HIMB5 chromosome, complete genomeBinding-protein-dependent transport system inner membrane component2e-1376.3
NC_010334:4925936:492593649259364926835900Shewanella halifaxensis HAW-EB4, complete genomebinding-protein-dependent transport systems inner membrane component2e-1375.9
NC_014210:5370868:5382898538289853841271230Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,binding-protein-dependent transport systems inner membrane component5e-1374.7
NC_003305:1035342:105860510586051059453849Agrobacterium tumefaciens str. C58 chromosome linear, completeABC transporter, membrane spanning protein5e-1374.3
NC_008148:583030:608947608947609600654Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component8e-1373.9
NC_016002:2591189:260637826063782607247870Pseudogulbenkiania sp. NH8B, complete genomeABC transporter permease1e-1273.6
NC_015556:1188500:120853012085301209429900Pseudomonas fulva 12-X chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-1273.6
NC_014222:1:147021470215538837Methanococcus voltae A3 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-1273.6
NC_005791:837505:858699858699859532834Methanococcus maripaludis S2, complete genomeABC-type proline/glycine betaine transport system, permease component related protein2e-1272.8
NC_015847:909938:930852930852931685834Methanococcus maripaludis XI chromosome, complete genomebinding-protein dependent transport system inner membrane protein2e-1272.8
NC_006347:3805500:380706738070673807891825Bacteroides fragilis YCH46, complete genomeglycine betaine/L-proline transport system permease4e-1271.6
NC_009381:1783886:1821090182109018222441155Yersinia pestis Pestoides F chromosome, complete genomeglycine betaine transporter membrane protein1e-1170.1
NC_007492:3180480:3205029320502932071252097Pseudomonas fluorescens PfO-1, complete genomeGlycine betaine/L-proline ABC transporter, ATPase/permease fusion protein, putative1e-1169.7
NC_006582:1138987:116018511601851161021837Bacillus clausii KSM-K16, complete genomeglycine betaine ABC transporter permease2e-1168.9
NC_007952:1587500:158958115895811590483903Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC proline/glycine betaine transporter, inner membrane subunit2e-1168.9
NC_010612:6385520:639888963988896399635747Mycobacterium marinum M, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ2e-1168.9
NC_020133:5965500:596862759686275969373747Mycobacterium liflandii 128FXT, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProZ2e-1168.9
NC_005071:588541:609012609012609926915Prochlorococcus marinus str. MIT 9313, complete genomeABC transporter,membrane component, glycine betaine/proline family4e-1168.6
NC_010505:2657683:265864226586422659493852Methylobacterium radiotolerans JCM 2831, complete genomebinding-protein-dependent transport systems inner membrane component3e-1168.6
NC_002944:292974:293657293657294373717Mycobacterium avium subsp. paratuberculosis K-10, complete genomeProZ4e-1168.2
NC_008595:312861:312861312861313577717Mycobacterium avium 104, complete genomeABC transporter, permease protein4e-1168.2
NC_015379:4426827:444064944406494441497849Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Glycine betaine ABC transporter, permease component6e-1167.8
NC_002678:6061448:6061448606144860634271980Mesorhizobium loti MAFF303099, complete genomeABC transporter permease protein8e-1167
NC_014643:1251847:126988812698881270634747Rothia dentocariosa ATCC 17931 chromosome, complete genomeglycine betaine/choline ABC transporter membrane protein9e-1167
NC_020207:2240115:2253560225356022552871728Enterococcus faecium NRRL B-2354, complete genomeGlycine betaine ABC transport permease OpuABC1e-1066.6
NC_008595:312861:312178312178312864687Mycobacterium avium 104, complete genomeABC transporter, permease protein1e-1066.2
NC_012526:4462:190471904719766720Deinococcus deserti VCD115, complete genomeputative proline/glycine betaine2e-1065.9
NC_002944:292974:292974292974293660687Mycobacterium avium subsp. paratuberculosis K-10, complete genomeProW3e-1065.5
NC_004557:2475030:247973424797342480561828Clostridium tetani E88, complete genomeputative glycine-betaine binding permease protein4e-1065.1
NC_009615:4693164:469577346957734696588816Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycine betaine/L-proline transport system permease1e-0963.5
NC_013457:979102:996543996543997343801Vibrio sp. Ex25 chromosome 2, complete genomehydroxymethylpyrimidine ABC transporter transmembrane component1e-0963.2
NC_010510:409469:424812424812425699888Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completebinding-protein-dependent transport systems inner membrane component2e-0962.8
NC_004193:3578710:359297735929773593837861Oceanobacillus iheyensis HTE831, complete genomeglycine betaine ABC transporter permease2e-0962.8
NC_003552:2634828:265639026563902657220831Methanosarcina acetivorans C2A, complete genomeglycine betaine/L-proline ABC transporter, permease3e-0962
NC_009921:3666898:368591536859153686760846Frankia sp. EAN1pec, complete genomebinding-protein-dependent transport systems inner membrane component7e-0960.8
NC_020133:5965500:596795059679505968630681Mycobacterium liflandii 128FXT, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW6e-0857.8
NC_010612:6385520:639963263996326400312681Mycobacterium marinum M, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW7e-0857.4
NC_016625:171341:185846185846186688843Burkholderia sp. YI23 chromosome 2, complete sequenceABC transporter permease1e-0757
NC_014614:86213:913679136792236870Clostridium sticklandii, complete genomeSsuC2e-0755.8
NC_019745:3778017:379342137934213794260840Gloeocapsa sp. PCC 7428, complete genomenitrate ABC transporter, inner membrane subunit3e-0755.1
NC_017100:2383487:238348723834872384161675Acetobacter pasteurianus IFO 3283-03, complete genomeD-methionine transporter permease protein5e-0754.7
NC_017125:2383467:238346723834672384141675Acetobacter pasteurianus IFO 3283-22, complete genomeD-methionine transporter permease protein5e-0754.7
NC_017146:2383509:238350923835092384183675Acetobacter pasteurianus IFO 3283-26, complete genomeD-methionine transporter permease protein5e-0754.7
NC_017150:2290681:229002622900262290700675Acetobacter pasteurianus IFO 3283-01-42C, complete genomeD-methionine transporter permease protein5e-0754.7
NC_014643:1251847:126919912691991269891693Rothia dentocariosa ATCC 17931 chromosome, complete genomeglycine ABC transporter permease2e-0653.1
NC_020126:4084114:414145741414574142266810Myxococcus stipitatus DSM 14675, complete genomeputative aliphatic sulfonates ABC transporter permease3e-0652.4
NC_012914:5618000:564387556438755644627753Paenibacillus sp. JDR-2, complete genomebinding-protein-dependent transport systems inner membrane component3e-0652.4
NC_010474:19256:206672066721506840Synechococcus sp. PCC 7002 plasmid pAQ7, complete sequenceABC-type nitrate/sulfonate/bicarbonate transport system, permease3e-0652.4
NC_010511:871905:879670879670880491822Methylobacterium sp. 4-46 chromosome, complete genomebinding-protein-dependent transport system inner membrane protein2e-0652.4
NC_011963:1482042:148487114848711485491621Rhodobacter sphaeroides KD131 chromosome 1, complete sequencebinding-protein-dependent transport system inner membrane protein2e-0652.4
NC_016628:537137:569671569671570471801Vibrio furnissii NCTC 11218 chromosome 2, complete sequencenitrate/sulfonate/bicarbonate ABC transporter permease3e-0652
NC_016514:891772:933689933689934516828Enterobacter cloacae EcWSU1 chromosome, complete genomeTaurine transport system permease protein tauC4e-0651.6
NC_009717:271385:284242284242285015774Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequencebinding-protein-dependent transport systems inner membrane component8e-0650.4
NC_016625:171341:186685186685187530846Burkholderia sp. YI23 chromosome 2, complete sequencehypothetical protein9e-0650.4