Pre_GI Gene

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Host: NC_007576 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007576:1854136 Lactobacillus sakei subsp. sakei 23K, complete genome

Host Lineage: Lactobacillus sakei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (23K) was originally isolated from a French sausage. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus sakei is the predominant lactic acid bacteria found on fresh meat. This organism is used as a starter in the production of fermented meat products, and plays a major role in preserving meat products by inhibiting the growth of other bacteria.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
185413618556621527Putative glycinebetainecarnitinecholine ABC transporter substrate binding and membrane-spanning subunitsQuickGO ontologyBLASTP
18556621856617956Putative glycine betainecarnitinecholine ABC transporter ATP-binding subunitQuickGO ontology
185674418581271384Glutathione reductaseQuickGO ontology
18580991859600Putative drugH antiporterQuickGO ontology
18597361860372637hypothetical protein
18604391860939501Putative transcriptional regulator MarR familyQuickGO ontologyBLASTP
18610741862032959Putative zinc-containing alcohol dehydrogenase oxidoreductaseQuickGO ontology
18620291862715687Hypothetical integral membrane proteinQuickGO ontologyBLASTP
18627121863571860Hypotetical proteinQuickGO ontology
186371318638291175S ribosomal RNAQuickGO ontologyBLASTP
18639211866839291923S ribosomal RNAQuickGO ontologyBLASTP
18670631868633157116S ribosomal RNAQuickGO ontologyBLASTP
186913018692461175S ribosomal RNAQuickGO ontologyBLASTP
18693371872255291923S ribosomal RNAQuickGO ontologyBLASTP
18724791873828135016S ribosomal RNAQuickGO ontologyBLASTP
187445318761351683Putative drug resistance ABC transporter two ATP-binding subunitsQuickGO ontology
187615518781521998Cell division protein GidAQuickGO ontology
187816718795721406tRNA modification GTPase trmEQuickGO ontology