Pre_GI: BLASTP Hits

Some Help

Query: NC_015951:107360:117786 Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete

Start: 117786, End: 118340, Length: 555

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014318:1537732:154140715414071541916510Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator8e-35146
NC_016111:1904859:191737419173741917961588Streptomyces cattleya NRRL 8057, complete genometetR family transcriptional regulator3e-32137
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator2e-31135
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator2e-31134
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator2e-30131
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator4e-29127
NC_015709:1769806:178762117876211788307687Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator3e-27121
NC_011365:1171536:117691611769161177497582Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator3e-26118
NC_015566:3417951:342511634251163425712597Serratia sp. AS12 chromosome, complete genomeregulatory protein TetR2e-25114
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR8e-25113
NC_007492:3180480:319538131953813195968588Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family1e-24112
NC_015063:122000:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator8e-23106
NC_015063:1:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator8e-23106
NC_013739:5535945:554067855406785541244567Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family3e-22104
NC_012912:2800884:281222328122232812819597Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family2e-21101
NC_010508:2776283:278996127899612790557597Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family3e-21101
NC_011283:2836000:286975928697592870352594Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator TetR family5e-21100
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator1e-2099.8
NC_013850:2846069:285969628596962860289594Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family4e-2097.8
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator4e-1994.4
NC_015434:1173794:119680711968071197418612Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator1e-1892.4
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator9e-1889.7
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family9e-1889.7
NC_015434:666692:702511702511703194684Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator1e-1789
NC_009664:4347718:435952443595244360177654Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family3e-1788.2
NC_014323:3976351:400723340072334007799567Herbaspirillum seropedicae SmR1 chromosome, complete genomeTetR family transcription regulator protein5e-1787.4
NC_009664:10718:169251692517515591Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family6e-1787
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family1e-1686.3
NC_016582:7699420:770664677066467707239594Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator5e-1684
NC_007508:5093365:510796051079605108592633Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family9e-1683.2
NC_015138:4205986:422692442269244227514591Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeregulatory protein TetR4e-1581.3
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR4e-1580.9
NC_017955:343931:358000358000358650651Modestobacter marinus, complete genomeTetR family transcriptional regulator2e-1479
NC_015656:2900730:291491029149102915503594Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR2e-1478.6
NC_008278:613329:625168625168625779612Frankia alni ACN14a, complete genomeputative tetR-family transcriptional regulator3e-1478.2
NC_014323:3976351:400574140057414006313573Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein5e-1477.4
NC_008146:20047:442044420444809606Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family4e-1374.3
NC_008705:27434:515445154452149606Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family4e-1374.3
NC_015580:3411802:342310334231033423645543Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator7e-1373.6
NC_009921:4903688:490439949043994905013615Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family2e-1272
NC_016582:6999074:700012270001227000724603Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator3e-1271.2
NC_013093:3068486:311332431133243113875552Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family4e-1270.9
NC_013521:2193203:219552721955272196075549Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family6e-1270.5
NC_014666:1117000:113313811331381133842705Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR2e-1168.6
NC_009921:1813500:184397718439771844687711Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family3e-1168.2
NC_007164:380000:392463392463393029567Corynebacterium jeikeium K411, complete genomeputative transcriptional regulator (TetR family)2e-1065.9
NC_017271:1477323:148206814820681482541474Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator2e-1065.5
NC_012704:696374:705911705911706603693Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family2e-1065.1
NC_009953:2867864:289295728929572893628672Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator2e-0962.4
NC_015957:7249873:726786572678657268458594Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR2e-0961.6
NC_008699:2294361:233821723382172338930714Nocardioides sp. JS614, complete genomeregulatory protein, TetR3e-0961.6
NC_013929:5850599:586993558699355870588654Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator3e-0961.2
NC_013739:5705325:573395457339545734559606Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family1e-0859.7
NC_009664:4423829:442487344248734425499627Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family4e-0857.4
NC_013526:955848:976385976385977116732Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeregulatory protein TetR4e-0857.4
NC_016582:11734963:117504131175041311750997585Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator6e-0857
NC_008596:3404832:342944634294463430054609Mycobacterium smegmatis str. MC2 155, complete genomeTetR family protein transcriptional regulatory protein6e-0857
NC_015957:7348269:735711373571137357745633Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR9e-0856.6
NC_003888:4523500:452350245235024524395894Streptomyces coelicolor A3(2), complete genometetR-family transcriptional regulator2e-0755.5
NC_017093:5225864:523639552363955237063669Actinoplanes missouriensis 431, complete genomeputative TetR-family transcriptional regulator3e-0754.7
NC_006361:4597718:462450046245004625183684Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator5e-0650.8
NC_014329:1261480:126727012672701267872603Corynebacterium pseudotuberculosis FRC41 chromosome, completeTetR family transcriptional regulator5e-0650.8
NC_016781:1261300:126709012670901267692603Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeHTH-type transcriptional repressor KstR5e-0650.8
NC_017031:1261289:126707912670791267681603Corynebacterium pseudotuberculosis P54B96 chromosome, completeHTH-type transcriptional repressor KstR5e-0650.8
NC_017300:1258861:126465112646511265253603Corynebacterium pseudotuberculosis 1002 chromosome, completeHTH-type transcriptional repressor KstR5e-0650.8
NC_017301:1261167:126695712669571267559603Corynebacterium pseudotuberculosis C231 chromosome, completeHTH-type transcriptional repressor KstR5e-0650.8
NC_017303:1261311:126710112671011267703603Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHTH-type transcriptional repressor KstR5e-0650.8
NC_017305:1258840:126463012646301265232603Corynebacterium pseudotuberculosis PAT10 chromosome, completeHTH-type transcriptional repressor KstR5e-0650.8
NC_016789:1334514:139597213959721396562591Corynebacterium diphtheriae PW8 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_016801:1361597:139529213952921395882591Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_016802:1317365:135106213510621351652591Corynebacterium diphtheriae HC02 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_016785:1321700:133174713317471332337591Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_016788:1349500:134957413495741350164591Corynebacterium diphtheriae HC04 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_016799:1343020:140561614056161406206591Corynebacterium diphtheriae 31A chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_016800:1378728:137872813787281379318591Corynebacterium diphtheriae BH8 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_016932:1246235:125202512520251252627603Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHTH-type transcriptional repressor KstR5e-0650.8
NC_016783:1374464:137446413744641375054591Corynebacterium diphtheriae INCA 402 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8