Pre_GI: BLASTP Hits

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Query: NC_014328:180482:197612 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 197612, End: 197863, Length: 252

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020291:270234:286915286915287154240Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative endonuclease containing a URI domain1e-23108
NC_010723:298954:317452317452317709258Clostridium botulinum E3 str. Alaska E43, complete genomeGIY-YIG domain protein6e-22102
NC_010674:311378:323994323994324251258Clostridium botulinum B str. Eklund 17B, complete genomeGIY-YIG domain protein7e-22102
NC_009922:315870:335768335768336031264Alkaliphilus oremlandii OhILAs, complete genomeExcinuclease ABC C subunit domain protein9e-22102
NC_004193:35698:435844358443844261Oceanobacillus iheyensis HTE831, complete genomehypothetical protein6e-1992.8
NC_013158:2303000:230516023051602305435276Halorhabdus utahensis DSM 12940, complete genomeExcinuclease ABC C subunit domain protein9e-1992
NC_012121:113912:132481132481132741261Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative nuclease1e-1891.7
NC_007759:1028977:107141610714161071679264Syntrophus aciditrophicus SB, complete genomepredicted endonuclease containing a URI domain4e-1889.7
NC_012673:1650139:165098016509801651258279Exiguobacterium sp. AT1b, complete genomeExcinuclease ABC C subunit domain protein2e-1787.4
NC_013204:2305140:230806023080602308425366Eggerthella lenta DSM 2243, complete genomeExcinuclease ABC C subunit domain protein9e-1785.5
NC_011900:1451545:145378214537821454081300Streptococcus pneumoniae ATCC 700669, complete genomehypothetical protein2e-1684.3
NC_017208:1:394893948939752264Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein4e-1579.7
NC_014221:2188250:219222621922262192504279Truepera radiovictrix DSM 17093 chromosome, complete genomeExcinuclease ABC C subunit domain protein1e-1478.2
NC_016884:157894:178155178155178418264Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeExcinuclease ABC C subunit domain-containing protein6e-1476.3
NC_012108:481657:500637500637500957321Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-1375.5
NC_009379:435404:437122437122437364243Polynucleobacter sp. QLW-P1DMWA-1, complete genomeExcinuclease ABC, C subunit domain protein1e-1271.6
NC_012796:2090000:209527920952792095539261Desulfovibrio magneticus RS-1, complete genomehypothetical protein5e-1166.6
NC_018607:1251357:126050312605031260778276Brachyspira pilosicoli B2904 chromosome, complete genomeendonuclease containing a URI domain7e-1165.9
NC_019908:700000:711532711532711867336Brachyspira pilosicoli P43/6/78 chromosome, complete genomeexcinuclease ABC subunit C2e-1064.7
NC_014330:2520906:252882225288222529157336Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative excinuclease ABC subunit C2e-1064.7
NC_018604:1489567:149822214982221498557336Brachyspira pilosicoli WesB complete genomeputative excinuclease ABC subunit C2e-1064.7
NC_005773:1333863:133713713371371337439303Pseudomonas syringae pv. phaseolicola 1448A, complete genomeendo/excinuclease domain protein2e-1064.3
NC_010681:1234500:125690612569061257235330Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExcinuclease ABC C subunit domain protein4e-1063.5
NC_015555:49842:8135181351847183368Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete23S ribosomal RNA7e-1062.8
NC_015555:327562:3747443747443781113368Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete23S ribosomal RNA7e-1062.8
NC_002696:3759551:376187837618783762249372Caulobacter crescentus CB15, complete genomehypothetical protein6e-1062.8
NC_012796:4075583:412763641276364127914279Desulfovibrio magneticus RS-1, complete genomehypothetical protein7e-1062.4
NC_015555:49842:6212562125654913367Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete23S ribosomal RNA8e-1062.4
NC_016616:2112211:214716621471662147462297Dechlorosoma suillum PS chromosome, complete genomeputative endonuclease containing a URI domain9e-1062.4
NC_007925:4060635:407708040770804077385306Rhodopseudomonas palustris BisB18, complete genomeExcinuclease ABC, C subunit-like3e-0960.5
NC_016945:666000:685453685453685758306Vibrio cholerae IEC224 chromosome II, complete sequenceendonuclease containing a URI domain1e-0858.9
NC_008260:2142311:215805421580542158443390Alcanivorax borkumensis SK2, complete genomehypothetical protein1e-0858.2
NC_014410:51711:8126881268846253358Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,23S ribosomal RNA2e-0857.8
NC_016628:373815:378606378606378896291Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein2e-0857.8
NC_003112:364869:368832368832369107276Neisseria meningitidis MC58, complete genomehypothetical protein3e-0857.4
NC_008767:1829500:184480418448041845079276Neisseria meningitidis FAM18, complete genomehypothetical protein3e-0857.4
NC_017513:1845069:185729818572981857573276Neisseria meningitidis G2136 chromosome, complete genomeGIY-YIG catalytic domain-containing protein3e-0857.4
NC_017514:1885154:189861518986151898890276Neisseria meningitidis M01-240149 chromosome, complete genomeGIY-YIG catalytic domain-containing protein3e-0857.4
NC_017515:372487:375336375336375611276Neisseria meningitidis M04-240196 chromosome, complete genomeGIY-YIG catalytic domain-containing protein3e-0857.4
NC_017516:364404:368367368367368642276Neisseria meningitidis H44/76 chromosome, complete genomeGIY-YIG catalytic domain-containing protein3e-0857.4
NC_017518:2041282:205284420528442053119276Neisseria meningitidis NZ-05/33 chromosome, complete genomeGIY-YIG catalytic domain-containing protein3e-0857.4
NC_002946:1556000:157036915703691570644276Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein4e-0856.6
NC_014965:2954876:296158129615812961865285Vibrio vulnificus MO6-24/O chromosome I, complete sequenceexcinuclease ABC C subunit-like protein6e-0856.2
NC_004459:767127:773834773834774118285Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted endonuclease6e-0856.2
NC_003116:2063500:207571320757132075988276Neisseria meningitidis Z2491, complete genomehypothetical protein8e-0855.8
NC_017512:1824966:183987918398791840154276Neisseria meningitidis WUE 2594, complete genomehypothetical protein8e-0855.8
NC_010120:1814592:182957318295731829848276Neisseria meningitidis 053442, complete genomeputative endonuclease8e-0855.8
NC_013016:1801000:181602618160261816301276Neisseria meningitidis alpha14 chromosome, complete genomeputative endonuclease8e-0855.8
NC_017511:1467090:148248014824801482755276Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein1e-0755.5
NC_011035:1564821:157964415796441579919276Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein1e-0755.5
NC_020156:2750000:275750327575032757856354Nonlabens dokdonensis DSW-6, complete genomeprotein containing N-terminal domain of the UvrABC system protein C2e-0754.7
NC_017025:1735835:174555617455561745864309Flavobacterium indicum GPTSA100-9, complete genomehypothetical protein2e-0754.7
NC_014934:2519999:253818625381862538434249Cellulophaga algicola DSM 14237 chromosome, complete genomeexcinuclease abc c subunit domain protein4e-0753.5
NC_007109:1105251:111997211199721120274303Rickettsia felis URRWXCal2, complete genomeExcinuclease ABC, C subunit, N-terminal6e-0753.1
NC_010831:2078329:210387121038712104125255Chlorobium phaeobacteroides BS1, complete genomeExcinuclease ABC C subunit domain protein8e-0752.4
NC_014934:2519999:253773925377392537987249Cellulophaga algicola DSM 14237 chromosome, complete genomeexcinuclease abc c subunit domain protein4e-0650.1
NC_016937:1625752:164607716460771646361285Francisella tularensis subsp. tularensis TI0902 chromosome,Excinuclease ABC C subunit-like protein5e-0650.1
NC_016933:1702500:172198417219841722268285Francisella tularensis TIGB03 chromosome, complete genomeExcinuclease ABC C subunit-like protein5e-0650.1
NC_006570:1625909:164623416462341646518285Francisella tularensis subsp. tularensis Schu 4, complete genomeEndonuclease5e-0650.1
NC_008245:1625715:164604016460401646324285Francisella tularensis subsp. tularensis FSC 198, complete genomeEndonuclease5e-0650.1
NC_015638:2588954:260368026036802603982303Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeExcinuclease ABC C subunit domain-containing protein8e-0649.3