Pre_GI: BLASTP Hits

Some Help

Query: NC_014323:3976351:4007233 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4007233, End: 4007799, Length: 567

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015138:4205986:422692442269244227514591Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeregulatory protein TetR3e-61234
NC_015580:3411802:342310334231033423645543Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator3e-39160
NC_015656:2900730:291491029149102915503594Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR1e-25115
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR1e-23109
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator3e-1891.3
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family3e-1891.3
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator1e-1789.7
NC_014323:3976351:400574140057414006313573Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein3e-1788.2
NC_007508:5093365:510796051079605108592633Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family3e-1788.2
NC_013093:3068486:311332431133243113875552Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family1e-1686.3
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator2e-1685.5
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator4e-1684.3
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator2e-1582
NC_011283:2836000:286975928697592870352594Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator TetR family1e-1479.3
NC_011365:1171536:117691611769161177497582Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator2e-1479
NC_013850:2846069:285969628596962860289594Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family2e-1479
NC_015951:107360:117786117786118340555Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeregulatory protein TetR2e-1478.6
NC_016582:7699420:770664677066467707239594Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator4e-1477.8
NC_016582:6999074:700012270001227000724603Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator7e-1477
NC_015709:1769806:178762117876211788307687Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator2e-1375.1
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator9e-1373.2
NC_017955:343931:358000358000358650651Modestobacter marinus, complete genomeTetR family transcriptional regulator1e-1273.2
NC_013739:5535945:554067855406785541244567Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family1e-1272.8
NC_015434:666692:702511702511703194684Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-1272.4
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family4e-1270.9
NC_009664:4423829:442487344248734425499627Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family5e-1270.9
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator7e-1270.1
NC_015434:1173794:119680711968071197418612Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator9e-1166.6
NC_003888:4523500:452350245235024524395894Streptomyces coelicolor A3(2), complete genometetR-family transcriptional regulator1e-1066.2
NC_007492:3180480:319538131953813195968588Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family1e-1066.2
NC_009921:1813500:184397718439771844687711Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-1066.2
NC_008278:613329:625168625168625779612Frankia alni ACN14a, complete genomeputative tetR-family transcriptional regulator1e-1066.2
NC_017271:1477323:148206814820681482541474Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator2e-1065.9
NC_016111:1904859:191737419173741917961588Streptomyces cattleya NRRL 8057, complete genometetR family transcriptional regulator3e-1065.1
NC_008705:27434:515445154452149606Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family2e-1065.1
NC_008146:20047:442044420444809606Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family2e-1065.1
NC_009664:4347718:435952443595244360177654Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-1065.1
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR3e-1064.7
NC_012704:696374:705911705911706603693Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family9e-1063.2
NC_015063:1:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator1e-0962.8
NC_015063:122000:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator1e-0962.8
NC_009921:4903688:490439949043994905013615Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family5e-0960.8
NC_009953:2867864:289295728929572893628672Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator5e-0960.8
NC_007164:380000:392463392463393029567Corynebacterium jeikeium K411, complete genomeputative transcriptional regulator (TetR family)1e-0859.3
NC_013929:5850599:586993558699355870588654Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator2e-0858.9
NC_017093:5225864:523639552363955237063669Actinoplanes missouriensis 431, complete genomeputative TetR-family transcriptional regulator2e-0858.5
NC_009921:5371483:537465553746555375305651Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family3e-0858.2
NC_010508:2776283:278996127899612790557597Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family4e-0857.8
NC_013521:2193203:219552721955272196075549Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family8e-0857
NC_013526:955848:976385976385977116732Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeregulatory protein TetR1e-0756.6
NC_016113:1143580:116248011624801163136657Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator3e-0755.1
NC_008699:2294361:233821723382172338930714Nocardioides sp. JS614, complete genomeregulatory protein, TetR3e-0755.1
NC_014318:1537732:154140715414071541916510Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator3e-0754.7
NC_014666:1117000:113313811331381133842705Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR4e-0754.7
NC_009664:10718:169251692517515591Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family5e-0754.3
NC_016785:1321700:133174713317471332337591Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeTetR family transcriptional regulator4e-0754.3
NC_016799:1343020:140561614056161406206591Corynebacterium diphtheriae 31A chromosome, complete genomeTetR family transcriptional regulator4e-0754.3
NC_016800:1378728:137872813787281379318591Corynebacterium diphtheriae BH8 chromosome, complete genomeTetR family transcriptional regulator4e-0754.3
NC_016788:1349500:134957413495741350164591Corynebacterium diphtheriae HC04 chromosome, complete genomeTetR family transcriptional regulator4e-0754.3
NC_015957:7348269:735711373571137357745633Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR6e-0753.9
NC_016147:3349272:335056133505613351142582Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator6e-0753.9
NC_012912:2800884:281222328122232812819597Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family6e-0753.9
NC_008596:3404832:342944634294463430054609Mycobacterium smegmatis str. MC2 155, complete genomeTetR family protein transcriptional regulatory protein7e-0753.9
NC_016789:1334514:139597213959721396562591Corynebacterium diphtheriae PW8 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_016801:1361597:139529213952921395882591Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_016802:1317365:135106213510621351652591Corynebacterium diphtheriae HC02 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_016783:1374464:137446413744641375054591Corynebacterium diphtheriae INCA 402 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_016147:151224:176252176252176779528Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR/AcrR family transcriptional regulator9e-0753.1
NC_015566:3417951:342511634251163425712597Serratia sp. AS12 chromosome, complete genomeregulatory protein TetR1e-0652.8
NC_015172:1195782:121013012101301210744615Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein TetR1e-0652.8
NC_006361:4597718:462450046245004625183684Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-0652
NC_015690:4469775:451910145191014519685585Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_013739:5705325:573395457339545734559606Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family3e-0651.2