Pre_GI: BLASTP Hits

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Query: NC_013929:5850599:5869935 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5869935, End: 5870588, Length: 654

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013526:955848:976385976385977116732Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeregulatory protein TetR2e-21102
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family6e-1787.4
NC_008278:613329:625168625168625779612Frankia alni ACN14a, complete genomeputative tetR-family transcriptional regulator3e-1685.1
NC_009953:2867864:289295728929572893628672Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator3e-1685.1
NC_015434:666692:702511702511703194684Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator9e-1683.6
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator2e-1479.3
NC_015709:1769806:178762117876211788307687Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator3e-1478.6
NC_016147:151224:176252176252176779528Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR/AcrR family transcriptional regulator1e-1376.6
NC_007164:380000:392463392463393029567Corynebacterium jeikeium K411, complete genomeputative transcriptional regulator (TetR family)2e-1375.5
NC_017955:343931:358000358000358650651Modestobacter marinus, complete genomeTetR family transcriptional regulator3e-1375.1
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator8e-1373.9
NC_015957:7348269:735711373571137357745633Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR1e-1272.8
NC_014323:3976351:400574140057414006313573Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein3e-1272
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator5e-1271.2
NC_009921:1813500:184397718439771844687711Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family6e-1270.9
NC_009664:4347718:435952443595244360177654Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family9e-1270.5
NC_016932:1246235:125202512520251252627603Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHTH-type transcriptional repressor KstR1e-1169.7
NC_014329:1261480:126727012672701267872603Corynebacterium pseudotuberculosis FRC41 chromosome, completeTetR family transcriptional regulator2e-1169.3
NC_016781:1261300:126709012670901267692603Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeHTH-type transcriptional repressor KstR2e-1169.3
NC_017031:1261289:126707912670791267681603Corynebacterium pseudotuberculosis P54B96 chromosome, completeHTH-type transcriptional repressor KstR2e-1169.3
NC_017300:1258861:126465112646511265253603Corynebacterium pseudotuberculosis 1002 chromosome, completeHTH-type transcriptional repressor KstR2e-1169.3
NC_017301:1261167:126695712669571267559603Corynebacterium pseudotuberculosis C231 chromosome, completeHTH-type transcriptional repressor KstR2e-1169.3
NC_017303:1261311:126710112671011267703603Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHTH-type transcriptional repressor KstR2e-1169.3
NC_017305:1258840:126463012646301265232603Corynebacterium pseudotuberculosis PAT10 chromosome, completeHTH-type transcriptional repressor KstR2e-1169.3
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator3e-1168.6
NC_003888:4523500:452350245235024524395894Streptomyces coelicolor A3(2), complete genometetR-family transcriptional regulator4e-1168.2
NC_013739:5535945:554067855406785541244567Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family5e-1167.8
NC_008699:2294361:233821723382172338930714Nocardioides sp. JS614, complete genomeregulatory protein, TetR7e-1167.4
NC_016788:1349500:134957413495741350164591Corynebacterium diphtheriae HC04 chromosome, complete genomeTetR family transcriptional regulator1e-1066.6
NC_016785:1321700:133174713317471332337591Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeTetR family transcriptional regulator1e-1066.6
NC_016799:1343020:140561614056161406206591Corynebacterium diphtheriae 31A chromosome, complete genomeTetR family transcriptional regulator1e-1066.6
NC_016800:1378728:137872813787281379318591Corynebacterium diphtheriae BH8 chromosome, complete genomeTetR family transcriptional regulator1e-1066.6
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR1e-1066.6
NC_016783:1374464:137446413744641375054591Corynebacterium diphtheriae INCA 402 chromosome, complete genomeTetR family transcriptional regulator2e-1066.2
NC_016582:7699420:770664677066467707239594Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator3e-1065.5
NC_014323:3976351:400723340072334007799567Herbaspirillum seropedicae SmR1 chromosome, complete genomeTetR family transcription regulator protein3e-1065.5
NC_007508:5093365:510796051079605108592633Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family3e-1065.1
NC_013093:3068486:311332431133243113875552Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family4e-1065.1
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR4e-1064.7
NC_016789:1334514:139597213959721396562591Corynebacterium diphtheriae PW8 chromosome, complete genomeTetR family transcriptional regulator4e-1064.7
NC_016801:1361597:139529213952921395882591Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeTetR family transcriptional regulator4e-1064.7
NC_016802:1317365:135106213510621351652591Corynebacterium diphtheriae HC02 chromosome, complete genomeTetR family transcriptional regulator4e-1064.7
NC_011365:1171536:117691611769161177497582Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator6e-1064.3
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator6e-1064.3
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family6e-1064.3
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator6e-1064.3
NC_006361:4597718:462450046245004625183684Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator5e-1064.3
NC_015566:3417951:342511634251163425712597Serratia sp. AS12 chromosome, complete genomeregulatory protein TetR8e-1063.9
NC_015063:122000:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator9e-1063.5
NC_015063:1:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator9e-1063.5
NC_016113:1143580:116248011624801163136657Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator2e-0962.8
NC_012912:2800884:281222328122232812819597Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family3e-0962
NC_012704:696374:705911705911706603693Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family5e-0961.2
NC_009921:4903688:490439949043994905013615Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-0860.1
NC_015580:3411802:342310334231033423645543Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator1e-0859.7
NC_010508:2776283:278996127899612790557597Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_015957:7249873:726786572678657268458594Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR2e-0858.9
NC_009664:4423829:442487344248734425499627Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-0858.9
NC_011283:2836000:286975928697592870352594Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator TetR family3e-0858.5
NC_014666:1117000:113313811331381133842705Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR6e-0857.8
NC_007492:3180480:319538131953813195968588Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family6e-0857.8
NC_015951:107360:117786117786118340555Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeregulatory protein TetR8e-0857
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator1e-0757
NC_013850:2846069:285969628596962860289594Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family1e-0757
NC_015138:4205986:422692442269244227514591Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeregulatory protein TetR1e-0757
NC_014318:1537732:154140715414071541916510Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator1e-0756.6
NC_008095:2031997:204409120440912044744654Myxococcus xanthus DK 1622, complete genometranscriptional regulator, TetR family1e-0756.6
NC_017093:5225864:523639552363955237063669Actinoplanes missouriensis 431, complete genomeputative TetR-family transcriptional regulator1e-0756.2
NC_015656:2900730:291491029149102915503594Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR3e-0755.1
NC_009921:5371483:537465553746555375305651Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family9e-0753.9
NC_016582:11734963:117504131175041311750997585Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_016582:175589:194439194439195059621Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_015434:1173794:119680711968071197418612Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_009664:10718:169251692517515591Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-0652.4
NC_018524:4848154:489638948963894896982594Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, lacI family protein5e-0651.2
NC_016582:2069677:2077881207788120828304950Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative type I polyketide synthase5e-0651.2
NC_013739:5705325:573395457339545734559606Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family7e-0650.8
NC_017904:5543490:555718255571825557778597Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-0650.4