Pre_GI: BLASTP Hits

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Query: NC_013716:5141269:5143386 Citrobacter rodentium ICC168, complete genome

Start: 5143386, End: 5144414, Length: 1029

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:5361207:5361207536120753622381032Escherichia coli O103:H2 str. 12009, complete genome16S rRNA m2G1207 methylase RsmC0652
AP010958:5361207:5361207536120753622381032Escherichia coli O103:H2 str. 12009 DNA, complete genome16S rRNA m2G1207 methylase RsmC0652
NC_011750:5045927:5049051504905150500821032Escherichia coli IAI39 chromosome, complete genome16S ribosomal RNA m2G1207 methyltransferase0652
NC_020211:689451:7112257112257122651041Serratia marcescens WW4, complete genome16S rRNA m(2)G1207 methyltransferase3e-140498
NC_016513:2103958:2119048211904821200521005Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeribosomal RNA small subunit methyltransferase C1e-76286
NC_013416:1748848:1764956176495617659601005Aggregatibacter actinomycetemcomitans D11S-1, complete genomeribosomal RNA small subunit methyltransferase C2e-76286
NC_007645:2294553:2295164229516422961921029Hahella chejuensis KCTC 2396, complete genome16S RNA G1207 methylase RsmC2e-38160
NC_009654:91096:1113921113921124531062Marinomonas sp. MWYL1, complete genomerRNA (guanine-N(2)-)-methyltransferase1e-37157
NC_004459:1794540:1814001181400118151311131Vibrio vulnificus CMCP6 chromosome I, complete sequence16S RNA G1207 methylase RsmC2e-1996.7
NC_014562:2871765:2897510289751028986281119Pantoea vagans C9-1 chromosome, complete genomeputative ribosomal RNA small subunit methyltransferase D8e-1994.7
NC_014471:135919:153039153039153635597Ignisphaera aggregans DSM 17230 chromosome, complete genomemethyltransferase small4e-1892.4
NC_011978:699500:720140720140720775636Thermotoga neapolitana DSM 4359, complete genome16S rRNA m(2)G 1207 methyltransferase4e-1789
NC_017208:108134:116429116429117028600Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete16S rRNA m(2)G 1207 methyltransferase4e-1685.9
NC_020134:2801199:280267028026702803266597Clostridium stercorarium subsp. stercorarium DSM 8532, completeS-adenosylmethionine-dependent methyltransferase5e-1685.5
NC_014171:109280:114379114379114978600Bacillus thuringiensis BMB171 chromosome, complete genome16S rRNA m(2)G 1207 methyltransferase6e-1685.5
NC_020164:2219612:223859422385942239202609Staphylococcus warneri SG1, complete genomehypothetical protein2e-1583.6
NC_014829:133305:135933135933136535603Bacillus cellulosilyticus DSM 2522 chromosome, complete genomemethyltransferase small2e-1480.1
NC_009828:1474970:147762114776211478253633Thermotoga lettingae TMO, complete genomemethyltransferase small2e-1480.1
NC_010506:4404377:4419087441908744203461260Shewanella woodyi ATCC 51908, complete genomerRNA (guanine-N(2)-)-methyltransferase4e-1479.3
NC_002976:177282:185105185105185713609Staphylococcus epidermidis RP62A, complete genomehypothetical protein5e-1479
NC_004461:277291:300854300854301462609Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein5e-1479
NC_003923:559208:569359569359569967609Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein4e-1479
NC_002953:561740:567990567990568598609Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein4e-1479
NC_017351:566717:576868576868577476609Staphylococcus aureus subsp. aureus 11819-97 chromosome, completemethyltransferase domain protein4e-1479
NC_007793:574580:584731584731585339609Staphylococcus aureus subsp. aureus USA300, complete genomeMethyltransferase small domain6e-1478.6
NC_002952:582365:590008590008590616609Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein6e-1478.6
NC_002758:592892:603043603043603651609Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein6e-1478.6
NC_002745:572959:578797578797579405609Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein6e-1478.6
NC_007795:511186:521337521337521945609Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein6e-1478.6
NC_010079:575123:585274585274585882609Staphylococcus aureus subsp. aureus USA300_TCH1516, completehypothetical protein6e-1478.6
NC_010163:145808:153809153809154402594Acholeplasma laidlawii PG-8A chromosome, complete genomeribosomal RNA small subunit methyltransferase C6e-1478.6
NC_002951:596000:606165606165606773609Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein6e-1478.6
NC_009782:596847:604490604490605098609Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein6e-1478.6
NC_009487:609170:619320619320619928609Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein6e-1478.6
NC_017337:580850:591001591001591609609Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein6e-1478.6
NC_017347:586629:594272594272594880609Staphylococcus aureus subsp. aureus T0131 chromosome, complete16S rRNA m(2)G 1207 methyltransferase6e-1478.6
NC_017342:2758157:277354027735402774148609Staphylococcus aureus subsp. aureus TCH60 chromosome, completemethyltransferase domain protein6e-1478.6
NC_017341:591952:598202598202598810609Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,methyltransferase small domain-containing protein6e-1478.6
NC_016912:511182:521333521333521941609Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein6e-1478.6
NC_009641:565103:575254575254575862609Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein6e-1478.6
NC_009632:609046:619196619196619804609Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein6e-1478.6
NC_017338:556319:562569562569563177609Staphylococcus aureus subsp. aureus JKD6159 chromosome, completemethyltransferase small domain-containing protein1e-1377.4
NC_015224:3892972:3917431391743139186181188Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative methyltransferase1e-1377.4
NC_014160:801618:830212830212830790579Thermosphaera aggregans DSM 11486 chromosome, complete genome16S rRNA m(2)G 1207 methyltransferase2e-1376.6
NC_012623:960327:982984982984983544561Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemethyltransferase small3e-1376.3
NC_003551:659236:673914673914674513600Methanopyrus kandleri AV19, complete genome16S rRNA G1207 methylase4e-1375.9
NC_007622:537195:547344547344547952609Staphylococcus aureus RF122, complete genomehypothetical protein4e-1375.9
NC_000868:500249:503367503367503954588Pyrococcus abyssi GE5, complete genomehypothetical protein6e-1375.1
NC_017098:840492:8413778413778425851209Spirochaeta africana DSM 8902 chromosome, complete genome16S RNA G1207 methylase RsmC6e-1375.1
NC_012121:198480:204499204499205104606Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative rRNA methylase2e-1273.6
NC_014151:3797861:3800511380051138016471137Cellulomonas flavigena DSM 20109 chromosome, complete genomemethyltransferase small3e-1273.2
NC_004193:119737:127947127947128561615Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-1272.8
NC_011766:1078001:107742310774231078025603Desulfurococcus kamchatkensis 1221n chromosome, complete genomeRibosomal RNA small subunit methyltransferase C (RRNA (Guanine-n2-)- methyltransferase)5e-1272
NC_016941:549373:557662557662558270609Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein8e-1271.6
NC_012225:2611680:261168026116802612321642Brachyspira hyodysenteriae WA1, complete genomemethyltransferase small domain protein8e-1271.6
NC_015474:182701:194133194133194720588Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein7e-1271.6
NC_015518:685885:687200687200687754555Acidianus hospitalis W1 chromosome, complete genomemethyltransferase small domain-containing protein1e-1171.2
NC_009033:996616:101659610165961017177582Staphylothermus marinus F1, complete genomemethyltransferase small1e-1171.2
NC_018704:124823:124823124823125422600Amphibacillus xylanus NBRC 15112, complete genomeputative methyltransferase2e-1170.5
NC_003413:1521080:153713615371361537723588Pyrococcus furiosus DSM 3638, complete genomehypothetical protein4e-1169.3
NC_014961:1114939:111436111143611114942582Desulfurococcus mucosus DSM 2162 chromosome, complete genome16S rRNA m(2)G 1207 methyltransferase5e-1168.9
NC_012883:287965:330200330200330787588Thermococcus sibiricus MM 739, complete genomeRibosomal RNA small subunit methyltransferase C1e-1067.4
NC_003063:757999:777367777367778236870Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-1066.2
NC_015581:1731120:173719317371931737774582Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomemethyltransferase small4e-1065.9
NC_015759:536929:536929536929537540612Weissella koreensis KACC 15510 chromosome, complete genomemethyltransferase small5e-1065.9
NC_013893:2406893:241960124196012420209609Staphylococcus lugdunensis HKU09-01 chromosome, complete genome16S rRNA m(2)G 1207 methyltransferase7e-1065.1
NC_012660:819381:840125840125840955831Pseudomonas fluorescens SBW25 chromosome, complete genomeprotein methyltransferase7e-0961.6
NC_013715:1606396:162446116244611625084624Rothia mucilaginosa DY-18, complete genome16S RNA G1207 methylase RsmC1e-0860.8
NC_014802:441000:455422455422456123702Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completehypothetical protein1e-0860.8
NC_015594:579354:601588601588602565978Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completemethyltransferase small1e-0860.8
NC_000853:1071078:109535310953531096147795Thermotoga maritima MSB8, complete genomeribosomal protein L11 methyltransferase, putative1e-0860.8
NC_014122:665684:670100670100670675576Methanocaldococcus infernus ME chromosome, complete genomemethylase1e-0860.8
NC_014448:414784:414066414066414797732Mycoplasma hyorhinis HUB-1 chromosome, complete genomeProtein-(Glutamine-N5) methyltransferase, release factor-specific2e-0860.5
NC_008787:437786:452759452759453460702Campylobacter jejuni subsp. jejuni 81-176, complete genomehypothetical protein2e-0860.1
NC_017280:435347:450319450319451020702Campylobacter jejuni subsp. jejuni M1 chromosome, complete genomehypothetical protein3e-0859.7
NC_012985:846202:847355847355848149795Candidatus Liberibacter asiaticus str. psy62, complete genomeprotoporphyrinogen oxidase (methyltransferase) protein3e-0859.7
NC_016800:1411000:1444537144453714460721536Corynebacterium diphtheriae BH8 chromosome, complete genomeputative transferase6e-0858.9
NC_016802:1317365:1401187140118714027221536Corynebacterium diphtheriae HC02 chromosome, complete genomeputative transferase6e-0858.9
NC_013169:2581500:2592250259225025938181569Kytococcus sedentarius DSM 20547, complete genomemethyltransferase family protein5e-0858.9
NC_013517:2607043:2622783262278326238681086Sebaldella termitidis ATCC 33386, complete genomemodification methylase, HemK family7e-0858.5
NC_016114:3938721:3961843396184339634291587Streptomyces flavogriseus ATCC 33331 chromosome, complete genomemethyltransferase small7e-0858.5
NC_016785:1357500:1394548139454813960831536Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative transferase9e-0858.2
NC_016782:1385800:1416396141639614179311536Corynebacterium diphtheriae 241 chromosome, complete genomeputative transferase9e-0858.2
NC_016786:1359064:1416661141666114181961536Corynebacterium diphtheriae HC01 chromosome, complete genomeputative transferase9e-0858.2
NC_008702:2892605:290008329000832900940858Azoarcus sp. BH72, complete genomeputative methyltransferase1e-0757.8
NC_016789:1432000:1461900146190014634351536Corynebacterium diphtheriae PW8 chromosome, complete genomeputative transferase2e-0757
NC_016783:1397975:1436988143698814385231536Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative transferase2e-0757
NC_002935:1378566:1428054142805414295891536Corynebacterium diphtheriae NCTC 13129, complete genomePutative transferase2e-0757
NC_013960:243884:246851246851247702852Nitrosococcus halophilus Nc4 chromosome, complete genomemodification methylase, HemK family2e-0757
NC_016787:1350676:1407974140797414095091536Corynebacterium diphtheriae HC03 chromosome, complete genomeputative transferase3e-0756.6
NC_016788:1376000:1411439141143914129741536Corynebacterium diphtheriae HC04 chromosome, complete genomeputative transferase3e-0756.6
NC_016790:1345638:1384041138404113855761536Corynebacterium diphtheriae VA01 chromosome, complete genomeputative transferase3e-0756.6
NC_016801:1422500:1458190145819014597251536Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative transferase2e-0756.6
NC_016799:1439000:1468206146820614697411536Corynebacterium diphtheriae 31A chromosome, complete genomeputative transferase2e-0756.6
NC_013172:2877722:2903760290376029053371578Brachybacterium faecium DSM 4810, complete genomemethyltransferase family protein3e-0756.2
NC_009616:183772:195982195982196758777Thermosipho melanesiensis BI429 chromosome, complete genomeribosomal L11 methyltransferase4e-0755.8
NC_007912:4125970:414786941478694148735867Saccharophagus degradans 2-40, complete genomeprotein methyltransferase hemK9e-0754.7
NC_008344:811386:844715844715845596882Nitrosomonas eutropha C91, complete genomemodification methylase, HemK family protein1e-0654.7
NC_014774:995000:101253010125301013411882Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeprotoporphyrinogen oxidase (methyltransferase) protein1e-0654.7
NC_009380:1663545:1677847167784716793311485Salinispora tropica CNB-440 chromosome, complete genomemethyltransferase small1e-0654.3
NC_017093:2357583:235758323575832358539957Actinoplanes missouriensis 431, complete genomeputative methyltransferase2e-0653.9
NC_019907:318077:319191319191320036846Liberibacter crescens BT-1 chromosome, complete genomepolypeptide chain release factor methylase2e-0653.9
NC_010725:2589014:2589014258901425900391026Methylobacterium populi BJ001, complete genomemethyltransferase small1e-0653.9
NC_011985:3282924:330227833022783303153876Agrobacterium radiobacter K84 chromosome 1, complete genomeprotoporphyrinogen oxidase (methyltransferase) protein1e-0653.9
NC_015387:1002955:101916010191601019990831Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeprotein-(glutamine-N5) methyltransferase, release factor-specific2e-0653.5
NC_015733:864959:897737897737898567831Pseudomonas putida S16 chromosome, complete genomeHemK family modification methylase3e-0653.1
NC_003047:2798367:281811428181142818995882Sinorhizobium meliloti 1021, complete genomePUTATIVE METHYLTRANSFERASE PROTEIN9e-0651.6
NC_008380:4532969:455318845531884554048861Rhizobium leguminosarum bv. viciae 3841, complete genomeputative protein methyltransferase1e-0551.2