Pre_GI Gene

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Host: NC_007622 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007622:537195 Staphylococcus aureus RF122, complete genome

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a common strain associated with mastitis in cattle. This organism is responsible for several hundred million dollars worth of annual economic loss to animal production each year. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5371955386491455glutamyl-tRNA synthetaseQuickGO ontologyBLASTP
539073539720648serine acetyltransferaseQuickGO ontologyBLASTP
5397045411041401cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
541097541501405hypothetical proteinBLASTP
541509542255747probable tRNArRNA methyltransferaseQuickGO ontologyBLASTP
542255542779525hypothetical proteinBLASTP
542860543429570RNA polymerase sigma factorQuickGO ontologyBLASTP
54354454368714450S ribosomal protein L33QuickGO ontologyBLASTP
543743543925183preprotein translocase subunitQuickGO ontologyBLASTP
543938544486549transcription antitermination proteinQuickGO ontologyBLASTP
54466754508942350S ribosomal protein L11QuickGO ontologyBLASTP
54529754598969350S ribosomal protein L1QuickGO ontologyBLASTP
54626154676150150S ribosomal protein L10QuickGO ontologyBLASTP
54685554716931550S ribosomal protein L7L12QuickGO ontologyBLASTP
547344547952609hypothetical proteinBLASTP
5481675517183552DNA-dependent RNA polymerase beta subunitQuickGO ontologyBLASTP
5518555554783624DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
555600555869270probable ribosomal proteinQuickGO ontologyBLASTP
55596755638041430S ribosomal protein S12QuickGO ontologyBLASTP
55644655691647130S ribosomal protein S7QuickGO ontologyBLASTP