Pre_GI Gene

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Host: NC_002976 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002976:177282 Staphylococcus epidermidis RP62A, complete genome

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a strongly adherent, slime-producing, pathogenic strain isolated from a patient with intravascular catheter-associated sepsis. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Highly resistant to many antibiotics including penicillins and cephalosporins.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
176657177298642serine acetyltransferaseQuickGO ontologyBLASTP
1772821786821401cysteinyl-tRNA synthetaseQuickGO ontologyBLASTP
178675179073399hypothetical proteinBLASTP
179081179830750RNA methyltransferase TrmH family group 3QuickGO ontologyBLASTP
179827180354528hypothetical proteinBLASTP
180424180999576RNA polymerase sigma factor sigW putativeQuickGO ontologyBLASTP
181123181266144ribosomal protein L33QuickGO ontologyBLASTP
181329181511183preprotein translocase SecE subunitQuickGO ontologyBLASTP
181522182070549transcription terminationantitermination factor NusGQuickGO ontologyBLASTP
182402182824423ribosomal protein L11QuickGO ontologyBLASTP
18303718373269650S ribosomal protein L1QuickGO ontologyBLASTP
184007184507501ribosomal protein L10QuickGO ontologyBLASTP
18454518491336950S ribosomal protein L7L12QuickGO ontologyBLASTP
185105185713609hypothetical proteinBLASTP
1859291894803552DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
1896121932353624DNA-directed RNA polymerase beta subunitQuickGO ontologyBLASTP
19356319382326130S ribosomal protein L7Ae putativeQuickGO ontologyBLASTP
19391419432741430S ribosomal protein S12QuickGO ontologyBLASTP
19439819486847130S ribosomal protein S7QuickGO ontologyBLASTP
1949881970692082translation elongation factor GQuickGO ontologyBLASTP