Pre_GI Gene

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Host: NC_010079 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010079:575123 Staphylococcus aureus subsp. aureus USA300_TCH1516, complete

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: USA300, a methicillin resistant strain of Staphylococcus aureus, has been implicated in epidemiologically unassociated outbreaks of skin and soft tissue infections among healthy individuals in at least 21 U.S. states, Canada and Europe. USA300 is also noted for its strong association with unusually invasive disease, including severe septicemia, necrotizing pneumonia and necrotizing fasciitis. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5751235765771455glutamate--tRNA ligaseQuickGO ontologyBLASTP
576916577647732serine O-acetyltransferaseQuickGO ontologyBLASTP
5776015790311431cysteine--tRNA ligaseQuickGO ontologyBLASTP
579024579428405hypothetical proteinBLASTP
579436580182747RNA methyltransferaseQuickGO ontologyBLASTP
580182580706525hypothetical proteinBLASTP
580787581356570possible DNA-binding proteinQuickGO ontologyBLASTP
581471581614144ribosomal protein L33QuickGO ontologyBLASTP
581670581852183possible Sec family Type I general secretory pathway preprotein translocase subunit SecEQuickGO ontologyBLASTP
581865582413549transcriptional antiterminator NusGQuickGO ontologyBLASTP
582594583016423ribosomal protein L11QuickGO ontologyBLASTP
583224583916693ribosomal protein L1QuickGO ontologyBLASTP
584188584688501ribosomal protein L10QuickGO ontologyBLASTP
584731585099369ribosomal protein L7L12QuickGO ontologyBLASTP
585274585882609hypothetical proteinBLASTP
5860975896483552DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
5897855934083624DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP
593488593799312possible RNA-binding ribosomal proteinQuickGO ontologyBLASTP
593897594310414ribosomal protein S12QuickGO ontologyBLASTP
594376594846471ribosomal protein S7QuickGO ontologyBLASTP
5972675984511185elongation factor EF1AQuickGO ontologyBLASTP