Pre_GI: BLASTP Hits

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Query: NC_013716:3708415:3721857 Citrobacter rodentium ICC168, complete genome

Start: 3721857, End: 3722150, Length: 294

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:4494000:451303045130304513323294Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein7e-39159
NC_003198:4513900:453022145302214530514294Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-39159
NC_003197:4551880:456256045625604562853294Salmonella typhimurium LT2, complete genomehypothetical protein4e-38156
NC_011147:4297513:430952143095214309814294Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-38156
NC_011274:4385039:439728543972854397578294Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-38156
NC_011294:4409137:441938144193814419674294Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-38156
NC_016810:4573172:458314045831404583433294Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-38156
NC_016831:4367000:437743043774304377723294Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-38156
NC_016856:4563435:457539045753904575683294Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-38156
NC_016857:4573173:458314145831414583434294Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein4e-38156
NC_016860:4649274:465995446599544660247294Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-38156
NC_016863:4513106:452299645229964523289294Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-38156
NC_017046:4571833:458180145818014582094294Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-38156
NC_003198:4397074:440703344070334407326294Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-38156
NC_004631:4381724:439168343916834391976294Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-38156
NC_016832:4368948:437890743789074379200294Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-38156
NC_011080:4543000:455299445529944553287294Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-38155
NC_011205:4564645:457660045766004576893294Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-38155
NC_011094:4442478:445247044524704452763294Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-37154
NC_016845:4539381:456140045614004561693294Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative CopG family helix-turn-helix protein4e-37153
NC_012912:4012112:402458740245874024880294Dickeya zeae Ech1591, complete genomeProtein of unknown function DUF17781e-35148
NC_004547:1062410:106978110697811070074294Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-35146
NC_012880:3982383:400087640008764001169294Dickeya dadantii Ech703, complete genomeProtein of unknown function DUF17783e-34143
NC_014500:564864:587253587253587546294Dickeya dadantii 3937 chromosome, complete genomeputative helix-turn-helix protein, copG family4e-34142
NC_014500:564864:581656581656581949294Dickeya dadantii 3937 chromosome, complete genomeputative helix-turn-helix protein, copG family2e-32137
NC_003902:3666544:367842936784293678719291Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-25114
NC_007086:1224867:126814712681471268437291Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-25114
NC_010688:1192410:124273212427321243022291Xanthomonas campestris pv. campestris, complete genomeputative DNA-binding protein2e-25114
NC_017271:3641705:365594136559413656231291Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein2e-25114
NC_012721:1686450:169357516935751693856282Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-1994.7
NC_014228:4408500:442126144212614421539279Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-1992.4
NC_015186:347346:354738354738355040303Acidiphilium multivorum AIU301, complete genomehypothetical protein3e-1477.4
NC_009484:318500:322246322246322575330Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein3e-1477
NC_010998:111052:130559130559130816258Rhizobium etli CIAT 652 plasmid pA, complete sequencehypothetical protein5e-1373.2
NC_012880:3529017:354971135497113549935225Dickeya dadantii Ech703, complete genomehypothetical protein2e-1064.3
NC_015942:2060349:206248120624812062753273Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein4e-1063.5
NC_009668:445134:464488464488464787300Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein4e-0857
NC_009720:900884:913634913634913933300Xanthobacter autotrophicus Py2, complete genomehypothetical protein3e-0857
NC_010725:1419272:146705814670581467396339Methylobacterium populi BJ001, complete genomeProtein of unknown function DUF17781e-0755.5
NC_014500:443874:464035464035464307273Dickeya dadantii 3937 chromosome, complete genomeputative cytoplasmic protein3e-0753.9
NC_014365:2888897:289193228919322892216285Desulfarculus baarsii DSM 2075 chromosome, complete genomeProtein of unknown function DUF17783e-0753.9
NC_007608:97092:120130120130120432303Shigella boydii Sb227 plasmid pSB4_227, complete sequencehypothetical protein7e-0752.8
NC_010660:175200:204009204009204311303Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencehypothetical protein7e-0752.8
NC_007607:87000:113078113078113368291Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein8e-0752.4
NC_021066:1393750:140395214039521404230279Raoultella ornithinolytica B6, complete genomehypothetical protein1e-0652
NC_006905:3780000:379030337903033790590288Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein2e-0650.8
NC_020181:1344259:136039813603981360664267Enterobacter aerogenes EA1509E, complete genomeFIG032766: hypothetical protein3e-0650.4
NC_016147:1672482:168687416868741687119246Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein4e-0650.4
NC_015186:491930:496572496572496886315Acidiphilium multivorum AIU301, complete genomehypothetical protein5e-0649.7