Pre_GI: BLASTP Hits

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Query: NC_013714:796442:804197 Bifidobacterium dentium Bd1, complete genome

Start: 804197, End: 804673, Length: 477

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009480:2932108:295235329523532953201849Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative polar amino acid ABC transporter,substrate-binding protein3e-36150
NC_002927:2636694:265544826554482656236789Bordetella bronchiseptica RB50, complete genomeputative amino-acid ABC transporter, periplasmic amino acid-binding protein2e-31134
NC_009848:354202:378793378793379608816Bacillus pumilus SAFR-032, complete genomeL-cystine ABC transporter substrate-binding protein8e-31132
NC_007622:2399347:242361524236152424394780Staphylococcus aureus RF122, complete genomeextracellular amino acid binding ABC transporter9e-27119
NC_010519:71365:909109091091692783Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein1e-2099
NC_008309:190550:214337214337215119783Haemophilus somnus 129PT, complete genomeamino acid ABC transporter, substrate-binding1e-2099
NC_009436:2685910:270448927044892705289801Enterobacter sp. 638, complete genomecystine transporter subunit7e-2096.3
NC_016514:2950860:295757829575782958378801Enterobacter cloacae EcWSU1 chromosome, complete genomecystine-binding periplasmic protein8e-2096.3
NC_016816:1912366:194686119468611947661801Pantoea ananatis LMG 5342, complete genomeABC transporter substrate-binding protein2e-1788.6
NC_009256:458649:480091480091480891801Burkholderia vietnamiensis G4 chromosome 1, complete sequenceextracellular solute-binding protein2e-1684.7
NC_010508:451184:465275465275466075801Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceextracellular solute-binding protein family 33e-1684.3
NC_007510:409843:409843409843410643801Burkholderia sp. 383 chromosome 1, complete sequenceABC amino acid transporter, periplasmic ligand binding protein4e-1684
NC_008542:483761:504205504205505005801Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceextracellular solute-binding protein, family 34e-1684
NC_008060:2913671:292018429201842920984801Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceextracellular solute-binding protein, family 34e-1684
NC_010551:415487:429248429248430048801Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceextracellular solute-binding protein family 38e-1682.8
NC_008800:2695977:271113927111392711939801Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cystine transporter subunit1e-1582
NC_008261:2614817:2614817261481726163251509Clostridium perfringens ATCC 13124, complete genomeamino acid ABC transporter, amino acid-binding protein/permease protein, His/Glu/Gln/Arg/opine family8e-1476.3
NC_010694:1502019:152486015248601525654795Erwinia tasmaniensis, complete genomeABC lysine/arginine/ornithine transporter, periplasmic ligand binding protein9e-1372.8
NC_014837:2803447:280880128088012809598798Pantoea sp. At-9b chromosome, complete genomecationic amino acid ABC transporter periplasmic-binding protein9e-1372.4
NC_007645:3870466:388925938892593890059801Hahella chejuensis KCTC 2396, complete genomeABC-type amino acid transport/signal transduction systems, periplasmic component/domain4e-1270.5
NC_014958:1335650:134834013483401349095756Deinococcus maricopensis DSM 21211 chromosome, complete genomeABC transporter periplasmic subunit6e-1166.6
NC_014306:3210311:324552832455283246325798Erwinia billingiae Eb661, complete genomelysine/arginine/ornithine ABC transporter, periplasmic ligand binding protein2e-1065.1
NC_007651:1726472:174854917485491749349801Burkholderia thailandensis E264 chromosome I, complete sequenceamino acid ABC transporter, periplasmic amino acid-binding protein4e-1063.5
NC_014562:2049921:205326920532692054060792Pantoea vagans C9-1 chromosome, complete genomePutative ABC transport system, periplasmic solute-binding protein precursor5e-1063.5
NC_011146:3089297:3089297308929730924403144Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor hybrid histidine kinase2e-0961.6
NC_012918:1814000:1823304182330418264473144Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase4e-0960.5
NC_013766:906550:9214219214219228631443Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein6e-0960.1
NC_003210:870587:8854408854408868821443Listeria monocytogenes EGD-e, complete genomehypothetical protein6e-0960.1
NC_015555:693461:693461693461694237777Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, periplasmic subunit family 37e-0959.7
NC_016818:3736213:376059437605943761388795Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic component of amino acid ABC-type transporter/signal transduction system1e-0858.9
NC_013956:2749685:275335827533582754155798Pantoea ananatis LMG 20103 chromosome, complete genomeArgT1e-0858.5
NC_016816:1676460:170492017049201705717798Pantoea ananatis LMG 5342, complete genomecationic amino acid ABC transporter substrate-binding protein2e-0858.2
NC_007494:867901:867901867901868692792Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceABC amino acid transporter, periplasmic binding protein4e-0857
NC_013791:2839516:284162228416222842479858Bacillus pseudofirmus OF4 chromosome, complete genomeABC transporter (substrate-binding protein)8e-0856.2
CP002797:4775780:479209547920954792841747Escherichia coli NA114, complete genomeGlutamine ABC transporter, periplasmic glutamine-binding protein1e-0755.8
NC_020300:675551:695690695690696442753Bartonella australis Aust/NH1, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein2e-0755.1
NC_014727:889132:904535904535905395861Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,amino acid ABC transporter substrate-binding protein2e-0755.1
NC_008529:197272:209319209319210179861Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeABC-type amino acid transport system, periplasmic component/domain2e-0755.1
NC_004557:558500:577754577754578569816Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein2e-0755.1
NC_015913:178451:194768194768195571804Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeamino acid ABC transporter, amino acid-binding protein2e-0755.1
NC_010184:4021688:402238440223844023163780Bacillus weihenstephanensis KBAB4, complete genomeextracellular solute-binding protein family 32e-0755.1
NC_004557:558500:576911576911577729819Clostridium tetani E88, complete genomecystine/glutamine-binding periplasmic protein2e-0754.7
NC_007929:67810:7094670946724031458Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGlutamine-binding protein / Glutamine transport system permease protein2e-0754.7
NC_008054:201075:217468217468218328861Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeAmino acid ABC transporter, substrate binding protein3e-0754.3
NC_014410:2149886:217043421704342171210777Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,extracellular solute-binding protein family 34e-0753.9
NC_015428:823420:8399038399038420502148Lactobacillus buchneri NRRL B-30929 chromosome, complete genomepolar amino acid ABC transporter inner membrane subunit5e-0753.5
NC_008577:1015419:102816310281631028897735Shewanella sp. ANA-3 chromosome 1, complete sequenceextracellular solute-binding protein, family 35e-0753.5
NC_011773:3982008:398341939834193984198780Bacillus cereus AH820 chromosome, complete genomeamino acid ABC transporter amino acid-binding protein8e-0752.8
NC_008600:3976045:397745639774563978235780Bacillus thuringiensis str. Al Hakam, complete genomeamino acid ABC transporter, amino acid-binding protein8e-0752.8
NC_005957:3975192:397767239776723978451780Bacillus thuringiensis serovar konkukian str. 97-27, completeamino acid ABC transporter, amino acid-binding protein9e-0752.8
NC_008027:5533311:553409655340965534857762Pseudomonas entomophila L48, complete genomeamino acid ABC transporter, periplasmic amino acid-binding protein1e-0652.4
NC_009381:2138625:217472321747232175466744Yersinia pestis Pestoides F chromosome, complete genomeglutamine ABC transporter periplasmic protein1e-0652
NC_012881:3004784:303306830330683033856789Desulfovibrio salexigens DSM 2638, complete genomeextracellular solute-binding protein family 32e-0652
NC_010634:2894631:293369429336942934437744Yersinia pseudotuberculosis PB1/+, complete genomecationic amino acid ABC transporter, periplasmic binding protein2e-0651.6
NC_006155:2979500:301575330157533016496744Yersinia pseudotuberculosis IP 32953, complete genomeglutamine ABC transporter periplasmic-binding protein2e-0651.6
NC_009708:1735903:173659417365941737337744Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeglutamine ABC transporter periplasmic protein2e-0651.6
NC_012668:1623350:162429916242991625081783Vibrio cholerae MJ-1236 chromosome 1, complete sequenceamino acid ABC transporter substrate-binding protein2e-0651.6
NC_014310:785220:794068794068794910843Ralstonia solanacearum PSI07 megaplasmid, complete sequenceamino-acid-binding periplasmic ABC transporter protein2e-0651.6
NC_010501:5442000:544314554431455443897753Pseudomonas putida W619, complete genomeextracellular solute-binding protein family 33e-0651.2
NC_015061:2927707:294646029464602947302843Rahnella sp. Y9602 chromosome, complete genomeextracellular solute-binding protein family 33e-0651.2
NC_011969:3879412:388082338808233881602780Bacillus cereus Q1 chromosome, complete genomeamino acid ABC transporter substrate-binding protein3e-0651.2
NC_017047:2957957:297671329767132977552840Rahnella aquatilis HX2 chromosome, complete genomefamily 3 extracellular solute-binding protein4e-0650.8
NC_002516:4321000:432560443256044326395792Pseudomonas aeruginosa PAO1, complete genomeprobable amino acid binding protein3e-0650.8
NC_012491:5628000:563079556307955631598804Brevibacillus brevis NBRC 100599, complete genomeprobable amino acid ABC transporter substrate binding protein3e-0650.8
NC_010694:2492378:249237824923782493124747Erwinia tasmaniensis, complete genomeGlutamine high-affinity transporter3e-0650.8
NC_016012:135500:151841151841152644804Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeamino acid ABC transporter ATP-binding protein3e-0650.8
NC_010520:1586000:160081116008111601629819Clostridium botulinum A3 str. Loch Maree, complete genomeamino acid ABC transporter, amino acid-binding protein4e-0650.4
NC_008463:1188951:119924211992421200033792Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative amino acid ABC transporter4e-0650.4
NC_015978:1266196:128338612833861284177792Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeABC transporter glutamine-binding protein glnH5e-0650.4
NC_013421:3117639:313823231382323138978747Pectobacterium wasabiae WPP163, complete genomecationic amino acid ABC transporter, periplasmic binding protein5e-0650.1
NC_003296:556836:602236602236603003768Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE SUBSTRATE-BINDING PERIPLASMIC (PBP) ABC TRANSPORTER PROTEIN7e-0649.7
NC_017986:2985514:300434230043423005094753Pseudomonas putida ND6 chromosome, complete genomeextracellular solute-binding protein8e-0649.7