Pre_GI: BLASTP Hits

Some Help

Query: NC_013410:3280039:3297795 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3297795, End: 3298640, Length: 846

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015574:2057602:206207020620702062936867Methanobacterium sp. SWAN-1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha3e-79295
NC_015216:405657:407972407972408829858Methanobacterium sp. AL-21 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha2e-75282
NC_011661:1332309:135741313574131358255843Dictyoglomus turgidum DSM 6724, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-1789.7
NC_009662:837500:844243844243845106864Nitratiruptor sp. SB155-2, complete genomefumarate/tartrate hydratase, alpha subunit4e-1685.5
NC_015320:1260344:128354412835441284362819Archaeoglobus veneficus SNP6 chromosome, complete genomehydro-lyase subunit alpha9e-1684.3
NC_012115:1122905:113245811324581133318861Nautilia profundicola AmH, complete genomefumarate hydratase, alpha subunit2e-1583.2
NC_014507:2276000:228628622862862287119834Methanoplanus petrolearius DSM 11571 chromosome, complete genomeFe-S type tartrate/fumarate subfamily hydro-lyase subunit alpha2e-1582.8
NC_003552:3092456:309581730958173096671855Methanosarcina acetivorans C2A, complete genomefumarate hydratase5e-1581.6
NC_009712:669647:698784698784699605822Candidatus Methanoregula boonei 6A8, complete genometartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit3e-1479
NC_020389:3106847:311177831117783112620843Methanosarcina mazei Tuc01, complete genomeFumarate hydratase class I, aerobic/ L(+)-tartrate dehydratase alpha subunit1e-1377
NC_010718:2551000:256200125620012562843843Natranaerobius thermophilus JW/NM-WN-LF, complete genomefumarase alpha subunit2e-1376.6
NC_003901:3698164:371562737156273716520894Methanosarcina mazei Go1, complete genomefumarate hydratase3e-1376.3
NC_009454:1389974:140318314031831404025843Pelotomaculum thermopropionicum SI, complete genomefumarate hydratase4e-1375.5
NC_004557:2711702:272045227204522721300849Clostridium tetani E88, complete genomefumarate hydratase5e-1375.1
NC_008390:2448379:2467096246709624686191524Burkholderia cepacia AMMD chromosome 1, complete sequencehydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-1273.6
NC_014935:342491:368246368246369097852Nitratifractor saLSUginis DSM 16511 chromosome, complete genomefumarase alpha subunit1e-1170.5
NC_015499:197945:207049207049207888840Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-1170.1
NC_009706:238160:270031270031270873843Clostridium kluyveri DSM 555 chromosome, complete genomefumarate hydratase1e-1170.1
NC_011837:238160:270031270031270873843Clostridium kluyveri NBRC 12016, complete genomefumarate hydratase1e-1170.1
NC_009698:3553365:355694335569433557785843Clostridium botulinum A str. Hall chromosome, complete genomefumarate hydratase2e-1169.3
NC_009697:3659834:365983436598343660676843Clostridium botulinum A str. ATCC 19397 chromosome, completefumarate hydratase2e-1169.3
NC_014122:726070:743594743594744433840Methanocaldococcus infernus ME chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit4e-1168.9
NC_009078:510525:5105255105255120601536Burkholderia pseudomallei 1106a chromosome II, complete sequencefumarate hydratase, class I4e-1168.6
NC_011297:1167615:117701911770191177861843Dictyoglomus thermophilum H-6-12, complete genomefumarate hydratase4e-1168.6
NC_012225:1657248:167212216721221672964843Brachyspira hyodysenteriae WA1, complete genomefumarate hydratase7e-1168.2
NC_009802:1827138:184514018451401845985846Campylobacter concisus 13826, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region1e-1067.4
NC_014328:4387303:441420444142044415046843Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefumarate hydratase subunit alpha1e-1067
NC_014910:1200605:1218907121890712204661560Alicycliphilus denitrificans BC chromosome, complete genomehydro-lyase, fe-s type, tartrate/fumarate subfamily, alpha subunit2e-1066.2
NC_013939:913890:914927914927915796870Deferribacter desulfuricans SSM1, complete genomefumarate hydratase class I subunit alpha2e-1066.2
NC_007974:2048000:206977520697752070617843Ralstonia metallidurans CH34 chromosome 2, complete sequencehydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region3e-1065.9
NC_012438:565419:571665571665572510846Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomefumarate hydratase6e-1065.1
NC_018691:2863659:2867498286749828690241527Alcanivorax dieselolei B5 chromosome, complete genomeFumarate hydratase I, alpha subunit domain protein5e-1065.1
NC_011898:2907017:292400329240032924845843Clostridium cellulolyticum H10, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit5e-1065.1
NC_010730:627465:640083640083640928846Sulfurihydrogenibium sp. YO3AOP1, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit5e-1065.1
NC_014153:2187409:2205868220586822074031536Thiomonas intermedia K12 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit1e-0963.9
NC_010524:3391075:3391075339107533926011527Leptothrix cholodnii SP-6, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit1e-0963.5
NC_019970:35985:634306343064272843Thermoanaerobacterium thermosaccharolyticum M0795, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily2e-0963.5
NC_019978:2036779:203815520381552039018864Halobacteroides halobius DSM 5150, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily2e-0963.2
NC_015682:205900:222628222628223467840Thermodesulfobacterium sp. OPB45 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha2e-0962.8
NC_014410:51711:768537685377695843Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit3e-0962.8
NC_015958:84270:960099600996851843Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha4e-0962.4
NC_014923:5868000:5880453588045358820061554Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit3e-0962.4
NC_015675:6423000:6435124643512464366771554Mesorhizobium opportunistum WSM2075 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha3e-0962.4
NC_019973:5797000:5809413580941358109661554Mesorhizobium australicum WSM2073, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily3e-0962.4
NC_014378:525717:525717525717526559843Acetohalobium arabaticum DSM 5501 chromosome, complete genomefumarase alpha subunit3e-0962.4
NC_009659:997779:99938199938110009191539Janthinobacterium sp. Marseille chromosome, complete genomefumarate hydratase, class I5e-0962
NC_004556:1132354:1145975114597511474921518Xylella fastidiosa Temecula1, complete genomefumarate hydratase5e-0961.6
NC_012440:1080675:108458410845841085429846Persephonella marina EX-H1, complete genomeL(+)-tartrate dehydratase subunit alpha (L-TTD alpha)5e-0961.6
NC_011274:793681:802525802525803370846Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fumarate hydratase8e-0961.2
NC_012778:2997:104121041211254843Eubacterium eligens ATCC 27750, complete genomefumarate hydratase7e-0961.2
NC_015856:3912195:3912871391287139144271557Collimonas fungivorans Ter331 chromosome, complete genomefumarate hydratase class I, aerobic1e-0860.8
NC_017243:424132:428630428630429472843Brachyspira intermedia PWS/A chromosome, complete genomefumarate hydratase1e-0860.8
NC_014804:1354970:135799213579921358855864Thermococcus barophilus MP chromosome, complete genomefumarate hydratase class I aerobic1e-0860.5
NC_015565:1511426:151734015173401518191852Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha2e-0860.1
NC_014387:79808:902839028391125843Butyrivibrio proteoclasticus B316 chromosome 1, complete genomefumarate hydratase alpha subunit FumA2e-0859.7
NC_016831:2209834:221974622197462220627882Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative hydro-lyase2e-0859.7
NC_011205:839425:849661849661850542882Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853fumarate hydratase2e-0859.7
NC_011294:781170:784631784631785476846Salmonella enterica subsp. enterica serovar Enteritidis strfumarate hydratase2e-0859.7
NC_011083:862901:873717873717874562846Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,fumarate hydratase3e-0859.3
NC_011080:819103:829831829831830676846Salmonella enterica subsp. enterica serovar Newport str. SL254,fumarate hydratase3e-0859.3
NC_003197:815964:825478825478826323846Salmonella typhimurium LT2, complete genomefumarate hydratase3e-0859.3
NC_011149:779903:789153789153789998846Salmonella enterica subsp. enterica serovar Agona str. SL483,fumarate hydratase3e-0859.3
NC_006905:848000:854123854123854968846Salmonella enterica subsp. enterica serovar Choleraesuis strfumarate hydratase3e-0859.3
NC_012125:793812:802678802678803523846Salmonella enterica subsp. enterica serovar Paratyphi C strainfumarate hydratase3e-0859.3
NC_016810:819489:824734824734825579846Salmonella enterica subsp. enterica serovar Typhimurium strputative hydro-lyase3e-0859.3
NC_016857:819429:824734824734825615882Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74fumarate hydratase3e-0859.3
NC_017046:819414:824719824719825564846Salmonella enterica subsp. enterica serovar Typhimurium str. 798hydro-lyase3e-0859.3
NC_016863:819478:825820825820826665846Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1fumarate hydratase3e-0859.3
NC_016860:857500:864308864308865153846Salmonella enterica subsp. enterica serovar Typhimurium strfumarate hydratase3e-0859.3
NC_016856:819482:825820825820826665846Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sfumarate hydratase3e-0859.3
NC_006526:1303635:1321511132151113230341524Zymomonas mobilis subsp. mobilis ZM4, complete genomefumarate hydratase5e-0858.5
NC_012792:310443:320835320835321770936Variovorax paradoxus S110 chromosome 2, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit6e-0858.5
NC_000961:1481685:148087614808761481694819Pyrococcus horikoshii OT3, complete genomefumarate hydratase7e-0858.2
NC_015555:49842:771617716178003843Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit9e-0857.8
NC_009633:3457185:348051034805103481352843Alkaliphilus metalliredigens QYMF chromosome, complete genomefumarate hydratase9e-0857.8
NC_018145:50237:5023750237517601524Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeFe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha8e-0857.8
NC_019942:987134:103055410305541031405852Aciduliprofundum sp. MAR08-339, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily1e-0757.4
NC_012781:4065:883688369681846Eubacterium rectale ATCC 33656, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit2e-0757
NC_009328:448224:4482244482244497711548Geobacillus thermodenitrificans NG80-2 chromosome, complete genomefumarase6e-0755.1
NC_009648:838000:845712845712846557846Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomefumarate hydratase2e-0653.5
NC_010320:1769486:178450317845031785345843Thermoanaerobacter sp. X514 chromosome, complete genomefumarate hydratase3e-0652.8
NC_014538:73272:798957989580737843Thermoanaerobacter sp. X513 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit alpha3e-0652.8
NC_010102:2287934:229787722978772298722846Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0651.6
NC_014376:6296:157201572016562843Clostridium saccharolyticum WM1 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit7e-0651.2