Pre_GI: BLASTP Hits

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Query: NC_013410:2179342:2179342 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2179342, End: 2181420, Length: 2079

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009614:29604:4245342453449662514Bacteroides vulgatus ATCC 8482 chromosome, complete genomeglycoside hydrolase1e-93344
NC_011898:1512213:1516222151622215177511530Clostridium cellulolyticum H10, complete genomeCarbohydrate binding family 62e-90333
NC_016791:1079322:1081000108100010825291530Clostridium sp. BNL1100 chromosome, complete genomebeta-xylosidase8e-89328
NC_016582:10159486:1018645710186457101878421386Streptomyces bingchenggensis BCW-1 chromosome, complete genomeglycoside hydrolase family protein2e-83310
NC_014484:1594396:1607821160782116088251005Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein2e-56220
NC_014924:2517068:2524231252423125253011071Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeglycoside hydrolase family 433e-51203
NC_013410:2179342:2203100220310022047581659Fibrobacter succinogenes subsp. succinogenes S85 chromosome,carbohydrate binding family 61e-48195
NC_013410:1152188:1153807115380711557321926Fibrobacter succinogenes subsp. succinogenes S85 chromosome,carbohydrate binding family 69e-45182
NC_019897:2959002:2972923297292329764233501Thermobacillus composti KWC4 chromosome, complete genomebeta-xylosidase1e-36155
NC_016935:4326644:4335544433554443374391896Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein XynD2e-35151
NC_019842:1919866:1930879193087919324171539Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-35150
NC_020410:1856376:1867651186765118691891539Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeendo-1,4-beta-xylanase (xylanase D)5e-35149
NC_007912:4579873:4579873457987345834333561Saccharophagus degradans 2-40, complete genomeMethionine biosynthesis MetW6e-34146
NC_003919:2956404:2976560297656029780741515Xanthomonas axonopodis pv. citri str. 306, complete genomearabinosidase1e-32142
NC_014817:332000:3373343373343392381905Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceglycoside hydrolase family 434e-28127
NC_003919:5023500:5028017502801750290511035Xanthomonas axonopodis pv. citri str. 306, complete genomearabinosidase3e-26120
NC_014833:1488994:1510070151007015113981329Ruminococcus albus 7 chromosome, complete genomeXylan 1,4-beta-xylosidase6e-26119
NC_013410:2179342:2205140220514022070111872Fibrobacter succinogenes subsp. succinogenes S85 chromosome,carbohydrate binding family 63e-25117
NC_014656:1956277:1962234196223419642101977Bifidobacterium longum subsp. longum BBMN68 chromosome, completebeta-xylosidase family enzyme1e-24115
NC_010816:1989868:1996038199603819980412004Bifidobacterium longum DJO10A, complete genomeCarbohydrate binding domain fused to beta-xylosidase family enzyme1e-24115
NC_015052:2071759:2081343208134320837242382Bifidobacterium longum subsp. infantis 157F, complete genomeendo-1,4-beta-xylanase2e-24115
NC_017221:179272:1909381909381934632526Bifidobacterium longum subsp. longum KACC 91563 chromosome,endo-1,4-beta-xylanase3e-24114
NC_015067:2032271:2041854204185420444062553Bifidobacterium longum subsp. longum JCM 1217, complete genomeendo-1,4-beta-xylanase4e-24114
NC_004307:1936725:1944390194439019469182529Bifidobacterium longum NCC2705, complete genomeendo-1,4-beta-xylanase D6e-24113
NC_014656:1365673:1367614136761413713303717Bifidobacterium longum subsp. longum BBMN68 chromosome, completeextracellular protein3e-23110
NC_017271:4764404:4768967476896747700011035Xanthomonas campestris pv. raphani 756C chromosome, completebeta-xylosidase (1,4-beta-D-xylan xylohydrolase) (Xylan1,4-beta-xylosidase)2e-22108
NC_010995:3640913:3646845364684536479721128Cellvibrio japonicus Ueda107, complete genomebeta-xylosidase/alpha-L-arabinfuranosidase, putative, gly43G3e-22107
NC_011832:913994:9326839326839352202538Candidatus Methanosphaerula palustris E1-9c, complete genomeCarbohydrate binding family 64e-20100
NC_012997:1446037:1470422147042214714411020Teredinibacter turnerae T7901, complete genomeglycoside hydrolase family 43 domain protein6e-2099.8
NC_015944:353652:3723353723353745032169Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequencecarbohydrate binding module (family 6) protein3e-1997.4
NC_009615:1553556:1557536155753615585401005Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycoside hydrolase family protein9e-1995.9
NC_006395:217139:2184032184032206972295Haloarcula marismortui ATCC 43049 plasmid pNG700, completeputative carbohydrate binding module (family 6) protein2e-1791.3
NC_011832:1949717:1953338195333819564453108Candidatus Methanosphaerula palustris E1-9c, complete genomeCarbohydrate binding family 64e-1687
NC_014623:7482229:7537533753753375394101878Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeglycoside hydrolase1e-1585.9
NC_016627:2799453:2804133280413328055571425Clostridium clariflavum DSM 19732 chromosome, complete genomebeta-xylosidase2e-1585.1
NC_014829:405104:4193934193934208111419Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeXylan 1,4-beta-xylosidase2e-1584.7
NC_011593:2650156:269921726992172700197981Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,glycoside hydrolase family protein3e-1584
NC_017219:2646157:269521826952182696123906Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeglycosyl hydrolase3e-1584
NC_007645:3870466:3872025387202538738511827Hahella chejuensis KCTC 2396, complete genomeprobable glycosyl hydrolase1e-1379
NC_013132:6385223:6388702638870263921003399Chitinophaga pinensis DSM 2588, complete genomeCarbohydrate binding family 67e-1376.3
NC_014958:514225:537535537535538497963Deinococcus maricopensis DSM 21211 chromosome, complete genomeglycoside hydrolase family 438e-1376.3
NC_014958:514225:532942532942533940999Deinococcus maricopensis DSM 21211 chromosome, complete genomeglycoside hydrolase family 437e-1273.2
NC_014655:130636:1306361306361338483213Leadbetterella byssophila DSM 17132 chromosome, complete genomeglycoside hydrolase family 438e-1272.8
NC_011898:1218500:1256230125623012576451416Clostridium cellulolyticum H10, complete genomeglycoside hydrolase family 432e-1171.6
NC_014655:2533929:2550158255015825517621605Leadbetterella byssophila DSM 17132 chromosome, complete genomealpha-N-arabinofuranosidase5e-1170.1
NC_014829:1154520:1157473115747311585341062Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeglycoside hydrolase family 438e-1169.3
NC_019968:552440:5524405524405541251686Prevotella dentalis DSM 3688 chromosome 2, complete sequencebeta-xylosidase9e-1169.3
NC_007912:3828980:3828980382898038324833504Saccharophagus degradans 2-40, complete genomehypothetical protein1e-1068.9
NC_018704:2417902:241899924189992419901903Amphibacillus xylanus NBRC 15112, complete genomexylosidase/arabinosidase1e-0965.5
NC_015761:2982000:3007380300738030089301551Salmonella bongori NCTC 12419, complete genomeglycosyl hydrolase3e-0964.3
NC_013526:530212:539196539196540116921Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeglycoside hydrolase family 433e-0963.9
NC_010001:232976:2366172366172381551539Clostridium phytofermentans ISDg, complete genomeglycoside hydrolase family 434e-0963.9
NC_011898:3973627:4002835400283540043941560Clostridium cellulolyticum H10, complete genomeglycoside hydrolase family 437e-0963.2
NC_010407:1775227:1782515178251517841611647Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative xylosidase/arabinosidase6e-0963.2
NC_019897:3057000:3080945308094530825191575Thermobacillus composti KWC4 chromosome, complete genomebeta-xylosidase2e-0861.6
NC_013730:3184602:3196730319673031981481419Spirosoma linguale DSM 74, complete genomeglycoside hydrolase family 434e-0860.5
NC_015732:2762424:2764176276417627657741599Spirochaeta caldaria DSM 7334 chromosome, complete genomeXylan 1,4-beta-xylosidase6e-0860.1
NC_013410:2179342:2199901219990122029003000Fibrobacter succinogenes subsp. succinogenes S85 chromosome,alpha-L-fucosidase7e-0859.7
NC_015594:214500:2187592187592199821224Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeglycoside hydrolase family 433e-0757.8
NC_013037:5442131:5443929544392954481044176Dyadobacter fermentans DSM 18053, complete genomeCarbohydrate binding family 64e-0757
NC_015690:4361000:4384920438492043864551536Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXylan 1,4-beta-xylosidase6e-0756.6
NC_016935:4117485:4150989415098941525241536Paenibacillus mucilaginosus 3016 chromosome, complete genomexylan 1,4-beta-xylosidase6e-0756.6
NC_015275:654959:6580996580996596551557Clostridium lentocellum DSM 5427 chromosome, complete genomeAlpha-N-arabinofuranosidase8e-0756.2
NC_014652:1651671:1658137165813716624594323Caldicellulosiruptor hydrothermalis 108 chromosome, completeglycoside hydrolase family 431e-0655.8
NC_009615:3638451:3680988368098836827811794Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycoside hydrolase family protein2e-0655.1
NC_014915:1909275:192324719232471924194948Geobacillus sp. Y412MC52 chromosome, complete genomeglycoside hydrolase family 432e-0655.1
NC_013411:2767400:278331127833112784258948Geobacillus sp. Y412MC61, complete genomeglycoside hydrolase family 432e-0655.1
NC_017079:4550406:4555094455509445561461053Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative glycoside hydrolase2e-0655.1
NC_009664:4423829:4472173447217344739331761Kineococcus radiotolerans SRS30216, complete genomeglycoside hydrolase family 434e-0653.9