Pre_GI Gene

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Host: NC_015275 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015275:654959 Clostridium lentocellum DSM 5427 chromosome, complete genome

Host Lineage: Cellulosilyticum lentocellum; Cellulosilyticum; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolation: River sediment with paper mill waste; Temp: Mesophile; Temp: 40C; Isolation:river sediment with paper mill waste; Country:United Kingdom: River Don, Scotland. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This is a cellulolytic bacterium isolated from river sediment containing paper-mill waste.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
654959655945987ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
655959656855897ABC-type transporter integral membrane subunitQuickGO ontologyBLASTP
6568556579761122glycoside hydrolase family 8QuickGO ontologyBLASTP
6580996596551557Alpha-N-arabinofuranosidaseQuickGO ontologyBLASTP
6597176618042088methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
6618086628631056Aldose 1-epimeraseQuickGO ontologyBLASTP
6629066648131908protein of unknown function DUF303 acetylesteraseQuickGO ontologyBLASTP
6650106661701161transcriptional regulator PucR familyQuickGO ontologyBLASTP
66632266763513143-phosphoshikimate 1-carboxyvinyltransferaseQuickGO ontologyBLASTP
6679246690301107release factor H-coupled RctB family proteinQuickGO ontologyBLASTP
669005669592588peptide chain release factor HQuickGO ontologyBLASTP
669678670256579transposase IS3IS911 family proteinQuickGO ontologyBLASTP
670298671098801Integrase catalytic regionQuickGO ontologyBLASTP
6716546729791326Acetylornithine transaminaseQuickGO ontologyBLASTP
6730106741641155Alcohol dehydrogenaseQuickGO ontologyBLASTP