Pre_GI Gene

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Host: NC_010816 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010816:1989868 Bifidobacterium longum DJO10A, complete genome

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19898681990629762DNA replication proteinQuickGO ontologyBLASTP
19906261991093468hypothetical proteinBLASTP
199127419927551482TransposaseQuickGO ontologyBLASTP
19927581993543786DNA replication proteinQuickGO ontologyBLASTP
19936151994586972TransposaseQuickGO ontologyBLASTP
199603819980412004Carbohydrate binding domain fused to beta-xylosidase family enzymeQuickGO ontologyBLASTP
199843520011402706endo-14-beta-xylanaseBeta-xylosidaseQuickGO ontologyBLASTP
20016662002406741hypothetical proteinBLASTP
20025192002788270Ribosomal protein S15QuickGO ontologyBLASTP
200306420058052742Polyribonucleotide nucleotidyltransferaseQuickGO ontologyBLASTP
200623220076261395permeaseQuickGO ontologyBLASTP
20078812008711831hypothetical proteinBLASTP
20089802009501522Ribosomal protein L10QuickGO ontologyBLASTP
20096102009990381Ribosomal protein L7L12QuickGO ontologyBLASTP
201024220117351494Tfp pilus assembly proteinQuickGO ontologyBLASTP