Pre_GI: BLASTP Hits

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Query: NC_013353:3474077:3504839 Escherichia coli O103:H2 str. 12009, complete genome

Start: 3504839, End: 3506464, Length: 1626

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
AP010958:3474077:3504839350483935064641626Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase01121
NC_016832:3020000:3032325303232530339441620Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Site-specific recombinase, phage integrase01037
NC_004631:3030580:3043685304368530451481464Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0931
NC_011283:785973:7925257925257941651641Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase0927
NC_013361:3867558:3901815390181539034221608Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase0866
NC_003198:3042000:3058163305816330598091647Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible integrase0860
NC_013716:5201097:5207462520746252091021641Citrobacter rodentium ICC168, complete genomeputative integrase0793
NC_012660:1579204:1604792160479216062341443Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase1e-49198
NC_002939:1866651:1874575187457518762451671Geobacter sulfurreducens PCA, complete genomeintegrative genetic element Gsu5, integrase2e-34147
NC_009952:2217877:2223872222387222254611590Dinoroseobacter shibae DFL 12, complete genomeputative integrase9e-33142
NC_003911:1265972:1277271127727112788601590Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family1e-29131
NC_014973:1941500:1955814195581419571001287Geobacter sp. M18 chromosome, complete genomeintegrase family protein1e-28128
NC_015740:2614317:263366526336652634567903Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-28127
NC_011146:1998981:2013194201319420144981305Geobacter bemidjiensis Bem, complete genomeintegrase family protein6e-28125
NC_012918:1697860:1704183170418317054751293Geobacter sp. M21 chromosome, complete genomeintegrase family protein7e-27122
NC_010511:7024412:7031164703116470326931530Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein7e-26119
NC_014973:3452100:3471071347107134723601290Geobacter sp. M18 chromosome, complete genomeintegrase family protein1e-25118
NC_008609:1394377:1408298140829814094431146Pelobacter propionicus DSM 2379, complete genomehypothetical protein1e-25118
NC_015410:2258800:2276000227600022773761377Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase family protein1e-25118
NC_011146:3426500:3474592347459234759021311Geobacter bemidjiensis Bem, complete genomeintegrase family protein2e-25117
NC_008027:1847040:1862344186234418636361293Pseudomonas entomophila L48, complete genomeintegrase2e-24114
NC_009456:787322:7927647927647941311368Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-23111
NC_009800:4529504:4532707453270745346561950Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family2e-22107
NC_010501:3987615:3992949399294939942741326Pseudomonas putida W619, complete genomeintegrase family protein5e-22106
NC_013456:2528284:2536921253692125386211701Vibrio sp. Ex25 chromosome 1, complete genomeintegrase4e-22106
NC_012796:2041579:2048611204861120503621752Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-21104
NC_009434:3611738:3619731361973136210711341Pseudomonas stutzeri A1501, complete genomeintegrase4e-21103
NC_014541:1231021:1236294123629412375351242Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein5e-21102
NC_015733:4130000:4140692414069241419091218Pseudomonas putida S16 chromosome, complete genomeintegrase family protein3e-20100
NC_015566:1127595:1135507113550711365861080Serratia sp. AS12 chromosome, complete genomeintegrase family protein1e-1998.2
NC_015567:1127780:1135692113569211367711080Serratia sp. AS9 chromosome, complete genomeintegrase family protein1e-1998.2
NC_010524:1005355:1017147101714710183131167Leptothrix cholodnii SP-6, complete genomeintegrase family protein8e-1995.5
NC_009348:2034500:2041208204120820424731266Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase family site specific recombinase1e-1792
NC_011757:4293000:4318726431872643204951770Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein2e-1791.3
NC_014844:2828370:2841263284126328429511689Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein2e-1791.3
NC_004603:1115134:1121252112125211223881137Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein2e-1790.9
NC_009434:608765:6778376778376802902454Pseudomonas stutzeri A1501, complete genomehypothetical protein3e-1790.5
NC_009434:3611738:3621234362123436224931260Pseudomonas stutzeri A1501, complete genomehypothetical protein6e-1789.4
NC_014117:132524:1736441736441747381095Burkholderia sp. CCGE1002 chromosome chromosome 1, completeintegrase family protein6e-1789.4
NC_010688:3229820:3237928323792832394601533Xanthomonas campestris pv. campestris, complete genomephage-related integrase1e-1688.2
NC_015740:3631326:3631326363132636323571032Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein1e-1688.2
NC_008782:1863853:1871054187105418726701617Acidovorax sp. JS42, complete genomephage integrase family protein2e-1687.4
NC_012796:2683711:2690065269006526917561692Desulfovibrio magneticus RS-1, complete genomeputative site-specific recombinase3e-1687
NC_009434:608765:6764126764126776831272Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-1687
NC_011000:3362382:3368967336896733707271761Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative integrase4e-1686.7
NC_013421:3752619:3762474376247437644141941Pectobacterium wasabiae WPP163, complete genomeintegrase family protein5e-1686.3
NC_007946:289425:2952282952282971681941Escherichia coli UTI89, complete genomeputative integrase6e-1686.3
NC_010084:2674972:2682560268256026845151956Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein1e-1585.1
NC_010804:831000:8402588402588422131956Burkholderia multivorans ATCC 17616 chromosome 1, completetyrosine recombinase1e-1585.1
NC_003919:1716831:1744033174403317455651533Xanthomonas axonopodis pv. citri str. 306, complete genomephage-related integrase1e-1585.1
NC_007643:3799425:3824154382415438258541701Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase3e-1584
NC_003919:1716831:1730204173020417315381335Xanthomonas axonopodis pv. citri str. 306, complete genomeintegrase3e-1584
NC_014355:139324:1433791433791448211443Candidatus Nitrospira defluvii, complete genomeputative integrase3e-1583.6
NC_013173:953633:9706779706779727402064Desulfomicrobium baculatum DSM 4028, complete genomeintegrase family protein3e-1480.9
NC_020409:584000:5846785846785863511674Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Phage integrase3e-1480.1
NC_009485:7021228:7039994703999470418501857Bradyrhizobium sp. BTAi1 chromosome, complete genomelambda integrase-like/ DNA breaking-rejoining enzyme, catalytic core5e-1479.7
NC_012808:58701:6196261962637671806Methylobacterium extorquens AM1, complete genomehypothetical protein5e-1479.7
NC_010688:1192410:1196622119662211981871566Xanthomonas campestris pv. campestris, complete genomephage-related integrase8e-1479
NC_010511:1641416:1641416164141616429631548Methylobacterium sp. 4-46 chromosome, complete genomeintegrase domain-containing protein2e-1377.4
NC_014153:2044500:2065464206546420667681305Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein2e-1377.4
NC_009720:216589:2196452196452212971653Xanthobacter autotrophicus Py2, complete genomeintegrase family protein2e-1377.4
NC_009439:4661102:4664986466498646666801695Pseudomonas mendocina ymp, complete genomehypothetical protein3e-1273.9
NC_011662:1160887:1170392117039211715971206Thauera sp. MZ1T, complete genomehypothetical protein1e-1172
NC_014972:3604534:3621721362172136228721152Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein2e-1171.2
NC_009511:2726296:2731027273102727328081782Sphingomonas wittichii RW1 chromosome, complete genomephage integrase family protein2e-1171.2
NC_014117:132524:1345211345211360951575Burkholderia sp. CCGE1002 chromosome chromosome 1, completehypothetical protein3e-1170.5
NC_007643:791500:7959047959047970641161Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase3e-1170.5
NC_007519:1782067:1787842178784217896921851Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein4e-1170.1
NC_013854:1686997:1697457169745716991721716Azospirillum sp. B510, complete genomephage integrase family protein6e-1169.7
NC_015850:736680:7427277427277441751449Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein5e-1169.7
NC_007778:3470661:3470661347066134723071647Rhodopseudomonas palustris HaA2, complete genomePhage integrase5e-1169.7
NC_012968:239476:2397482397482412021455Methylotenera mobilis JLW8, complete genomehypothetical protein1e-1068.6
NC_008702:815264:8306858306858323551671Azoarcus sp. BH72, complete genomeputative integrase3e-1067.4
NC_010725:4618000:4625361462536146269831623Methylobacterium populi BJ001, complete genomelambda integrase-like/DNA breaking-rejoining enzyme, catalytic core3e-1067
NC_014965:2200974:2204394220439422057281335Vibrio vulnificus MO6-24/O chromosome I, complete sequenceintegrase1e-0965.1
NC_015381:3789661:3796625379662537982231599Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative phage-related integrase2e-0964.3
NC_014307:1619000:1623749162374916253741626Ralstonia solanacearum CFBP2957 chromosome, complete genomephage integrase2e-0964.3
NC_021150:4350461:4356424435642443582321809Azotobacter vinelandii CA6, complete genomephage integrase-like protein3e-0963.5
NC_012560:4350465:4356428435642843582361809Azotobacter vinelandii DJ, complete genomephage integrase-like protein3e-0963.5
NC_015857:265721:2874152874152891691755Brucella pinnipedialis B2/94 chromosome chromosome 1, completephage integrase family site specific recombinase4e-0963.2
NC_010742:264433:2860402860402878061767Brucella abortus S19 chromosome 1, complete sequencesite-specific recombinase, phage integrase family7e-0962.8
NC_006932:266000:2876562876562894221767Brucella abortus biovar 1 str. 9-941 chromosome I, completesite-specific recombinase, phage integrase family7e-0962.8
NC_012441:264795:2864122864122881781767Brucella melitensis ATCC 23457 chromosome I, complete sequencehypothetical protein7e-0962.8
NC_017271:3641705:3684013368401336854131401Xanthomonas campestris pv. raphani 756C chromosome, completeintegrase7e-0962.8
NC_007618:262415:2840352840352857891755Brucella melitensis biovar Abortus 2308 chromosome I, completePhage integrase:Phage integrase, N-terminal SAM-like7e-0962.8
NC_017244:264921:2863552863552881031749Brucella melitensis M28 chromosome chromosome 1, complete sequencesite-specific recombinase, phage integrase family6e-0962.8
NC_017246:264917:2863502863502880981749Brucella melitensis M5-90 chromosome chromosome I, completehypothetical protein6e-0962.8
NC_010682:460523:4937344937344950531320Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein9e-0962.4
NC_008228:816000:8211628211628230211860Pseudoalteromonas atlantica T6c, complete genomephage integrase1e-0861.6
NC_010511:915313:9290119290119306001590Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-0861.2
NC_015594:214500:2285072285072297541248Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeintegrase family protein2e-0861.2
NC_007434:1712000:1762688176268817641361449Burkholderia pseudomallei 1710b chromosome I, complete sequencePhage integrase family domain protein4e-0860.5
NC_015850:1006980:1027150102715010289371788Acidithiobacillus caldus SM-1 chromosome, complete genomephage integrase4e-0860.5
NC_016010:1822212:1855472185547218566231152Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintegrase1e-0758.9
NC_007434:1001514:1016158101615810173961239Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative phage-related integrase1e-0758.5
NC_007508:1221500:1227118122711812285991482Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative integrase1e-0758.2
NC_006350:845513:8574748574748588321359Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phage-related integrase1e-0758.2
NC_009076:779407:7927997927997941571359Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family1e-0758.2
NC_020911:4465500:4473465447346544747601296Octadecabacter antarcticus 307, complete genomeDNA integration/recombination/inversion protein3e-0757.4
NC_010725:356609:3691903691903708721683Methylobacterium populi BJ001, complete genomeintegrase family protein3e-0757.4
NC_007298:3764048:3776475377647537781541680Dechloromonas aromatica RCB, complete genomePhage integrase3e-0757
NC_010682:460523:4676864676864692871602Ralstonia pickettii 12J chromosome 1, complete sequencephage integrase4e-0757
NC_013521:3204250:3209439320943932105511113Sanguibacter keddieii DSM 10542, complete genomesite-specific recombinase XerD5e-0756.6
NC_014721:729942:7313247313247325021179Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein6e-0756.2
NC_015975:752927:7675827675827686791098Lactobacillus ruminis ATCC 27782 chromosome, complete genomeintegrase6e-0756.2
NC_010511:5424004:5437251543725154387231473Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein9e-0755.5
NC_015977:3215770:3260060326006032612921233Roseburia hominis A2-183 chromosome, complete genomeintegrase/recombinase, XerC/CodV family protein1e-0655.1
NC_009256:2509806:2517264251726425185321269Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase domain/SAM domain-containing protein1e-0655.1
NC_008699:1132790:1159085115908511602361152Nocardioides sp. JS614, complete genomephage integrase family protein2e-0654.7
NC_013446:4281250:4294269429426942959961728Comamonas testosteroni CNB-2, complete genomePhage integerase2e-0654.7
NC_020133:5485528:5502600550260055037691170Mycobacterium liflandii 128FXT, complete genomeprophage integrase2e-0654.3
NC_015125:3284095:328857732885773289311735Microbacterium testaceum StLB037, complete genomeintegrase2e-0654.3
NC_015422:3366500:3376628337662833779141287Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein3e-0654.3
NC_007626:3393940:3402977340297734043441368Magnetospirillum magneticum AMB-1, complete genomeIntegrase3e-0653.9
NC_020908:2788852:2797829279782927990701242Octadecabacter arcticus 238, complete genomeputative integrase3e-0653.9
NC_009802:1570215:158237615823761583269894Campylobacter concisus 13826, complete genomelipoprotein5e-0653.1
NC_020299:127480:145428145428146327900Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeintegrase/recombinase XerD6e-0652.8
NC_011000:1023800:1035090103509010364601371Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage-related integrase9e-0652.4
NC_010084:695817:7080887080887094581371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein9e-0652.4
NC_009256:3056000:3062577306257730639471371Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein9e-0652.4
NC_010804:2808676:2815315281531528166851371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase / tyrosine recombinase9e-0652.4