Pre_GI: BLASTP Hits

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Query: NC_013315:2059007:2064131 Clostridium difficile CD196 chromosome, complete genome

Start: 2064131, End: 2065540, Length: 1410

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:2067015:2072139207213920735481410Clostridium difficile BI1, complete genometwo-component sensor histidine kinase0931
NC_008261:1048515:1053806105380610552331428Clostridium perfringens ATCC 13124, complete genomesensor histidine kinase3e-108392
NC_003366:1091766:1097054109705410984811428Clostridium perfringens str. 13, complete genometwo-component sensor histidine kinase4e-108392
NC_004557:2289135:2304838230483823062861449Clostridium tetani E88, complete genomeethanolamine utilization sensory transduction histidine kinase2e-86320
NC_014614:284005:2908202908202922381419Clostridium sticklandii, complete genomeSignal transduction histidine kinase7e-73275
NC_009633:286677:2918822918822932911410Alkaliphilus metalliredigens QYMF chromosome, complete genomesignal transduction histidine kinase1e-71271
NC_013192:63111:7418174181755841404Leptotrichia buccalis DSM 1135, complete genomesignal transduction histidine kinase9e-70264
NC_013517:1055854:1131726113172611331231398Sebaldella termitidis ATCC 33386, complete genomesignal transduction histidine kinase7e-67254
NC_012491:5914500:5934092593409259355521461Brevibacillus brevis NBRC 100599, complete genometwo-component sensor histidine kinase4e-55215
NC_009253:1381401:1383081138308113845591479Desulfotomaculum reducens MI-1 chromosome, complete genomesignal transduction histidine kinase3e-48192
NC_014019:3543389:3561801356180135632341434Bacillus megaterium QM B1551 chromosome, complete genomeethanolamine two-component sensor histidine kinase4e-45182
NC_018870:705900:7198827198827213511470Thermacetogenium phaeum DSM 12270 chromosome, complete genomesensor histidine kinase6e-44178
NC_016584:1998000:2018766201876620201871422Desulfosporosinus orientis DSM 765 chromosome, complete genomesignal transduction histidine kinase6e-43175
NC_013595:9149273:9168119916811991696121494Streptosporangium roseum DSM 43021, complete genomeputative signal transduction histidine kinase1e-28127
NC_010168:1373337:1391491139149113929541464Renibacterium salmoninarum ATCC 33209 chromosome, complete genomesensory transduction protein kinase2e-27124
NC_013521:940495:9578009578009592781479Sanguibacter keddieii DSM 10542, complete genomesignal transduction histidine kinase3e-27123
NC_008699:1816392:1816392181639218178671476Nocardioides sp. JS614, complete genomehistidine kinase, dimerisation/phosphoacceptor6e-25115
NC_015145:2693749:2730271273027127317371467Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomesignal transduction histidine kinase1e-24115
NC_008578:591357:5913575913575928291473Acidothermus cellulolyticus 11B, complete genomesignal transduction histidine kinase2e-24114
NC_014550:2355500:2369888236988823713751488Arthrobacter arilaitensis Re117, complete genomeputative signal transduction histidine kinase1e-23111
NC_016109:5455060:5467591546759154691441554Kitasatospora setae KM-6054, complete genomeputative two-component system sensor kinase2e-23110
NC_014643:54500:6046160461620261566Rothia dentocariosa ATCC 17931 chromosome, complete genomesensor histidine kinase6e-23108
NC_015574:1676798:1695092169509216971102019Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase5e-1789.7
NC_007498:357484:3768073768073805263720Pelobacter carbinolicus DSM 2380, complete genometwo component sensor histidine kinase5e-1789.4
NC_014217:800406:8151018151018161531053Starkeya novella DSM 506 chromosome, complete genomesignal transduction histidine kinase9e-1788.6
NC_015676:1663700:1665586166558616672441659Methanosalsum zhilinae DSM 4017 chromosome, complete genomesignal transduction histidine kinase5e-1686.3
NC_015676:1417456:1432257143225714352683012Methanosalsum zhilinae DSM 4017 chromosome, complete genomesignal transduction histidine kinase4e-1686.3
NC_014932:1232346:1301168130116813025861419Bartonella clarridgeiae 73, complete genomehypothetical protein1e-1482
NC_012846:1888000:1902787190278719042411455Bartonella grahamii as4aup, complete genomesensor histidine kinase3e-1480.5
NC_007355:970670:9875989875989903542757Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein3e-1480.5
NC_017249:7917586:7924527792452779257231197Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1480.1
NC_004463:2344128:2356412235641223576561245Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein3e-1480.1
NC_008783:222000:2470612470612485031443Bartonella bacilliformis KC583, complete genomesensor histidine kinase1e-1378.2
NC_015574:1474967:1492207149220714946212415Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase1e-1377.8
NC_020300:1344453:1359142135914213605721431Bartonella australis Aust/NH1, complete genomesensor histidine kinase3e-1377
NC_015216:1941000:1945174194517419466731500Methanobacterium sp. AL-21 chromosome, complete genomesignal transduction histidine kinase3e-1377
NC_020301:1486695:1504171150417115056011431Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomesensor histidine kinase3e-1377
NC_015676:109743:1466261466261492982673Methanosalsum zhilinae DSM 4017 chromosome, complete genomesignal transduction histidine kinase6e-1375.9
NC_010161:2050816:2068528206852820699851458Bartonella tribocorum CIP 105476, complete genomehypothetical protein7e-1375.5
NC_007722:851129:8623228623228634191098Erythrobacter litoralis HTCC2594, complete genomeputative signal transduction histidine kinase with GAF domain2e-1273.9
NC_005955:1284500:1301114130111413025711458Bartonella quintana str. Toulouse, complete genomehypothetical protein2e-1273.9
NC_007355:2426000:2426018242601824297643747Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesignal-transducing histidine kinase8e-1272
NC_015574:1970967:1987565198756519892231659Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase1e-1171.6
NC_011894:6793497:6807127680712768082901164Methylobacterium nodulans ORS 2060, complete genomesignal transduction histidine kinase1e-1171.6
NC_011757:5742290:5744893574489357459391047Methylobacterium chloromethanicum CM4, complete genomesignal transduction histidine kinase2e-1170.9
NC_015321:4287945:4287945428794542889701026Fluviicola taffensis DSM 16823 chromosome, complete genomesignal transduction histidine kinase2e-1170.9
NC_014253:431942:4453354453354474642130Methanohalobium evestigatum Z-7303 chromosome, complete genomesignal transduction histidine kinase5e-1169.3
NC_014408:1340016:1362183136218313641711989Methanothermobacter marburgensis str. Marburg chromosome, completesensory transduction histidine kinase1e-1068.2
NC_007925:3911323:3923391392339139246081218Rhodopseudomonas palustris BisB18, complete genomesignal transduction histidine kinase2e-1067.8
NC_017249:4365935:4384007438400743851761170Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1067.4
NC_015216:405657:4241564241564258591704Methanobacterium sp. AL-21 chromosome, complete genomesignal transduction histidine kinase2e-1067.4
NC_004463:7683426:7696203769620376974081206Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein3e-1067
NC_003901:2685716:2711444271144427152233780Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase6e-1065.9
NC_005956:1572500:1588481158848115899381458Bartonella henselae str. Houston-1, complete genomehypothetical protein6e-1065.9
NC_007355:2039435:2054203205420320570402838Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesensory transduction histidine kinase1e-0965.1
NC_020389:2288541:2315191231519123189703780Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-0965.1
NC_011884:2051723:2051723205172320545602838Cyanothece sp. PCC 7425, complete genomesignal transduction histidine kinase2e-0964.3
NC_017187:691769:6945016945016963541854Arcobacter butzleri ED-1, complete genometwo-component sensor kinase3e-0963.5
NC_014408:1193239:1194297119429711956791383Methanothermobacter marburgensis str. Marburg chromosome, completesensory transduction histidine kinase3e-0963.5
NC_009464:2881771:2892338289233828942661929Uncultured methanogenic archaeon RC-I, complete genomepredicted signal transduction histidine kinase3e-0963.5
NC_003552:1492500:1510392151039215122421851Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase9e-0962
NC_009464:931647:9355969355969374461851Uncultured methanogenic archaeon RC-I, complete genomeputative signal transduction histidine kinase3e-0860.5
NC_003901:2685716:2703485270348527070003516Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase3e-0860.5
NC_002678:4618555:4620483462048346215141032Mesorhizobium loti MAFF303099, complete genometwo-component sensor protein4e-0860.1
NC_017249:3229500:323225332322533233203951Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-0859.7
NC_003552:1157294:1157294115729411597862493Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase8e-0858.9
NC_017192:714346:7163637163637182341872Arcobacter sp. L, complete genometwo-component sensor kinase1e-0758.5
NC_020389:1083517:1097343109734310983621020Methanosarcina mazei Tuc01, complete genomeSensory transduction histidine kinase1e-0758.5
NC_020389:1730376:1730376173037617326882313Methanosarcina mazei Tuc01, complete genomesensory transduction histidine kinase1e-0758.5
NC_003901:1268995:1285023128502312875182496Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase2e-0757.8
NC_012988:1459961:1493218149321814944381221Methylobacterium extorquens DM4, complete genomesignal transduction histidine kinase2e-0757.8
NC_003901:2685716:2707585270758527109083324Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase2e-0757.4
NC_014253:933261:9412849412849429961713Methanohalobium evestigatum Z-7303 chromosome, complete genomesignal transduction histidine kinase3e-0757
NC_003901:2906493:2906493290649329091502658Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase7e-0755.8
NC_014408:1193239:1193239119323911942971059Methanothermobacter marburgensis str. Marburg chromosome, completesensory transduction histidine kinase2e-0654.7
NC_020389:2288541:2311522231152223148033282Methanosarcina mazei Tuc01, complete genomesensory transduction histidine kinase3e-0653.9
NC_015216:1941000:1943517194351719451271611Methanobacterium sp. AL-21 chromosome, complete genomesignal transduction histidine kinase4e-0653.5
NC_014364:2246524:2277833227783322795421710Spirochaeta smaragdinae DSM 11293 chromosome, complete genomesignal transduction histidine kinase8e-0652.4
NC_013859:61586:8057180571817881218Azospirillum sp. B510 plasmid pAB510e, complete sequencetwo-component sensor histidine kinase9e-0652