Pre_GI: BLASTP Hits

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Query: NC_013199:2058857:2074089 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2074089, End: 2075168, Length: 1080

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013410:3280039:331712333171233318106984Fibrobacter succinogenes subsp. succinogenes S85 chromosome,group 1 glycosyl transferase1e-27124
NC_015500:2112975:2127417212741721285861170Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase group 12e-21103
NC_000913:2092559:2101415210141521025331119Escherichia coli K12, complete genomelipopolysaccharide biosynthesis protein4e-21102
NC_010473:2183567:2192423219242321935411119Escherichia coli str. K-12 substr. DH10B, complete genomelipopolysaccharide biosynthesis protein4e-21102
AC_000091:2096672:2105528210552821066461119Escherichia coli W3110 DNA, complete genomelipopolysaccharide biosynthesis protein4e-21102
NC_012759:1983975:1993898199389819950161119Escherichia coli BW2952 chromosome, complete genomelipopolysaccharide biosynthesis protein4e-21102
NC_010067:807129:8164358164358175291095Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-20100
NC_007908:1328832:1353266135326613543811116Rhodoferax ferrireducens T118, complete genomeglycosyl transferase, group 14e-1995.9
NC_014033:103020:1236321236321247351104Prevotella ruminicola 23 chromosome, complete genomehypothetical protein5e-1892
NC_011753:206178:2205122205122216271116Vibrio splendidus LGP32 chromosome 1, complete genomeputative glycosyl transferase1e-1790.9
NC_015578:61820:8014680146812491104Treponema primitia ZAS-2 chromosome, complete genomeWfbF2e-1584
NC_015572:1252000:1293914129391412950381125Methylomonas methanica MC09 chromosome, complete genomegroup 1 glycosyl transferase2e-1583.6
NC_009483:4434375:4438486443848644396461161Geobacter uraniireducens Rf4 chromosome, complete genomegroup 1 glycosyl transferase1e-1067.4
NC_015850:217495:219527219527220123597Acidithiobacillus caldus SM-1 chromosome, complete genomeglycosyl transferase family protein2e-0963.9
NC_014972:544146:5618295618295655603732Desulfobulbus propionicus DSM 2032 chromosome, complete genomegroup 1 glycosyl transferase2e-0963.5
NC_004663:44647:5001150011511321122Bacteroides thetaiotaomicron VPI-5482, complete genomeputative glycosyltransferase6e-0962
NC_010814:2074266:2079111207911120802591149Geobacter lovleyi SZ, complete genomeglycosyl transferase group 17e-0962
NC_008390:818571:8397848397848435093726Burkholderia cepacia AMMD chromosome 1, complete sequenceglycosyl transferase, group 11e-0861.2
NC_020211:1704500:1719646171964617207221077Serratia marcescens WW4, complete genomeglycosyl transferase, group 1 family protein1e-0860.8
NC_008593:980731:1001330100133010024211092Clostridium novyi NT, complete genomeglycosyl transferase, group 1 family protein, putative2e-0860.5
NC_009698:120119:1372461372461383611116Clostridium botulinum A str. Hall chromosome, complete genomemannosyltransferase5e-0858.9
NC_009697:120117:1372441372441383591116Clostridium botulinum A str. ATCC 19397 chromosome, completemannosyltransferase5e-0858.9
NC_009495:128000:1444411444411455561116Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeglycosyl transferase family protein5e-0858.9
NC_011206:2549132:2549795254979525516241830Acidithiobacillus ferrooxidans ATCC 53993, complete genomeglycosyl transferase group 16e-0858.5
NC_007508:4283750:4296206429620642987222517Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomebifunctional glycosyltransferase1e-0757.8
NC_014935:1389000:1417905141790514189631059Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeglycosyl transferase group 11e-0757.8
NC_005773:1135374:1136954113695411394432490Pseudomonas syringae pv. phaseolicola 1448A, complete genomemannosyltransferase1e-0757.8
NC_012563:122000:1383771383771394921116Clostridium botulinum A2 str. Kyoto, complete genomeputative mannosyltransferase2e-0757
NC_010520:121077:1382271382271393421116Clostridium botulinum A3 str. Loch Maree, complete genomeputative mannosyltransferase3e-0756.6
NC_012658:125500:1418851418851430001116Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative mannosyltransferase3e-0756.6
NC_010682:1234769:1241303124130312454994197Ralstonia pickettii 12J chromosome 1, complete sequenceglycosyl transferase group 13e-0756.6
NC_009699:122000:1392501392501403651116Clostridium botulinum F str. Langeland chromosome, complete genomemannosyltransferase3e-0756.2
NC_020181:360500:3928873928873965283642Enterobacter aerogenes EA1509E, complete genomeputative Glycosyltransferase4e-0756.2
NC_010516:127000:1442341442341453491116Clostridium botulinum B1 str. Okra, complete genomeputative mannosyltransferase4e-0756.2
NC_011761:2641481:2650455265045526562025748Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completegroup 1 glycosyl transferase4e-0756.2
NC_012880:3827390:3839805383980538423572553Dickeya dadantii Ech703, complete genomeglycosyl transferase group 16e-0755.5
NC_017986:1155811:1179009117900911827673759Pseudomonas putida ND6 chromosome, complete genomeglycosyl transferase, group 11e-0654.3
NC_015757:1329012:1345498134549813483772880Sulfobacillus acidophilus TPY chromosome, complete genomeglycosyl transferase, group 11e-0654.3
NC_016884:2194419:2202297220229722055273231Sulfobacillus acidophilus DSM 10332 chromosome, complete genomegroup 1 glycosyl transferase2e-0654.3
NC_008553:1156285:1159577115957711633623786Methanosaeta thermophila PT, complete genomeglycosyl transferase, group 12e-0653.9
NC_008358:798390:8204148204148241363723Hyphomonas neptunium ATCC 15444, complete genomeputative mannosyltransferase2e-0653.9
NC_008313:3112440:3131629313162931347093081Ralstonia eutropha H16 chromosome 1, complete sequenceGlycosyltransferase2e-0653.5
NC_005139:343500:3563413563413574231083Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0653.1
NC_017047:3936624:3951370395137039524311062Rahnella aquatilis HX2 chromosome, complete genomegroup 1 glycosyl transferase6e-0652
NC_014328:180482:2031582031582042761119Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative glycosyltransferase8e-0651.6
NC_007958:830000:8464368464368474701035Rhodopseudomonas palustris BisB5, complete genomeglycosyl transferase, group 19e-0651.6
NC_007335:1159000:1173422117342211770813660Prochlorococcus marinus str. NATL2A, complete genomeputative Glycosyltransferase9e-0651.6