Pre_GI: BLASTP Hits

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Query: NC_012967:3549880:3581981 Escherichia coli B str. REL606 chromosome, complete genome

Start: 3581981, End: 3583204, Length: 1224

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012947:248000:2579722579722591951224Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein0796
NC_010468:231000:2409422409422421651224Escherichia coli ATCC 8739, complete genomehypothetical protein0796
NC_009800:3685651:3693802369380236949171116Escherichia coli HS, complete genomehypothetical protein0707
NC_011748:3983432:4017600401760040187451146Escherichia coli 55989, complete genomehypothetical protein0700
CU928145:3983432:4017600401760040187451146Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein0700
NC_010498:3838419:3864118386411838653411224Escherichia coli SMS-3-5, complete genomehypothetical protein5e-180630
NC_008258:3581583:3589810358981035910331224Shigella flexneri 5 str. 8401, complete genomehypothetical protein5e-174610
NC_004337:3621985:3629549362954936307721224Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-173609
NC_004337:3590323:3629549362954936307721224Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-173609
NC_017328:3655876:3664405366440536656281224Shigella flexneri 2002017 chromosome, complete genomehypothetical protein1e-173609
NC_011741:3709081:3716476371647637176991224Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-173608
CU928160:3709081:3716476371647637176991224Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein3e-173608
NC_016822:3946500:395575239557523956597846Shigella sonnei 53G, complete genomehypothetical protein2e-133475
NC_007384:3741708:375267637526763753521846Shigella sonnei Ss046, complete genomehypothetical protein2e-133475
NC_010473:3722571:374705937470593747841783Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein5e-132471
AC_000091:3976888:398834239883423989124783Escherichia coli W3110 DNA, complete genomehypothetical protein5e-132471
NC_000913:3624826:364931436493143650096783Escherichia coli K12, complete genomehypothetical protein5e-132471
NC_007613:3470314:349805534980553498849795Shigella boydii Sb227, complete genomehypothetical protein2e-128459
CP002516:246767:2565802565802578021223Escherichia coli KO11, complete genome2e-128459
NC_013353:4313462:431970243197024320547846Escherichia coli O103:H2 str. 12009, complete genome3e-128458
NC_009801:3956917:396430339643033965148846Escherichia coli E24377A, complete genomehypothetical protein3e-128458
CP002185:3822470:384827138482713849116846Escherichia coli W, complete genomeconserved hypothetical protein3e-128458
AP010958:4313462:431970243197024320547846Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-128458
NC_011415:3887997:389763738976373898482846Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-128457
NC_004741:4132056:414370641437064144299594Shigella flexneri 2a str. 2457T, complete genome4e-78291
NC_013361:4566779:457352145735214574105585Escherichia coli O26:H11 str. 11368 chromosome, complete genome7e-77288
NC_013364:4306000:431198043119804312294315Escherichia coli O111:H- str. 11128, complete genome3e-54213
NC_013364:4306000:431246643124664312825360Escherichia coli O111:H- str. 11128, complete genome2e-46186
NC_013364:4306000:431302043130204313202183Escherichia coli O111:H- str. 11128, complete genome7e-29128
NC_013361:4566779:457430045743004574482183Escherichia coli O26:H11 str. 11368 chromosome, complete genome7e-29128
NC_011415:3887997:389867738986773898859183Escherichia coli SE11 chromosome, complete genomehypothetical protein7e-29128
NC_009801:3956917:396534339653433965525183Escherichia coli E24377A, complete genomehypothetical protein7e-29128
NC_010658:3622610:363133336313333631515183Shigella boydii CDC 3083-94, complete genome2e-28127