Pre_GI: BLASTP Hits

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Query: NC_012917:3378759:3385787 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3385787, End: 3386110, Length: 324

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:2270000:229130322913032291659357Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein5e-33139
NC_012560:3667177:367921936792193679554336Azotobacter vinelandii DJ, complete genomehypothetical protein4e-28123
NC_021150:3667176:367921836792183679553336Azotobacter vinelandii CA6, complete genomehypothetical protein4e-28123
NC_014910:242845:278244278244278573330Alicycliphilus denitrificans BC chromosome, complete genomeaddiction module killer protein2e-25114
NC_005126:1223042:124191812419181242235318Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-25113
NC_008782:3110744:312731231273123127662351Acidovorax sp. JS42, complete genomeprotein of unknown function DUF8913e-25113
NC_014365:2888897:289678328967832897121339Desulfarculus baarsii DSM 2075 chromosome, complete genomeaddiction module killer protein4e-24109
NC_017265:1136000:113608111360811136401321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative addiction module killer protein1e-23108
NC_005810:1130251:114785811478581148178321Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-23108
NC_008149:3251196:326880332688033269120318Yersinia pestis Nepal516, complete genomeprophage protein2e-23107
NC_008150:650899:651490651490651807318Yersinia pestis Antiqua, complete genomeputative prophage protein2e-23107
NC_009381:2939782:295738829573882957705318Yersinia pestis Pestoides F chromosome, complete genomeprophage protein2e-23107
NC_017168:4155143:415677041567704157087318Yersinia pestis A1122 chromosome, complete genomeprophage protein2e-23107
NC_013959:2801557:281473728147372815060324Sideroxydans lithotrophicus ES-1 chromosome, complete genomeaddiction module killer protein2e-2097.8
NC_017033:1052000:107205810720581072372315Frateuria aurantia DSM 6220 chromosome, complete genomeputative addiction module killer protein2e-1890.9
NC_004578:6089958:610763261076326107955324Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1890.9
NC_007517:2870657:287565328756532875943291Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF8917e-1785.9
NC_014973:54449:650356503565325291Geobacter sp. M18 chromosome, complete genomeaddiction module killer protein1e-1685.1
NC_010943:325739:337553337553337840288Stenotrophomonas maltophilia K279a, complete genomeputative phage-related protein2e-1684
NC_013416:939668:942292942292942603312Aggregatibacter actinomycetemcomitans D11S-1, complete genomeaddiction module killer protein2e-1684
NC_003143:1233128:123475212347521235063312Yersinia pestis CO92, complete genomeputative prophage protein6e-1682.8
NC_009655:1357486:136660113666011366918318Actinobacillus succinogenes 130Z chromosome, complete genomeaddiction module killer protein7e-1682.4
NC_014228:2883500:288453628845362884823288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-1682.4
NC_005230:32647:361893618936479291Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein8e-1682.4
NC_019697:1879769:190086519008651901218354Chamaesiphon minutus PCC 6605, complete genomeputative addiction module killer protein2e-1581.3
NC_014394:1373602:140626614062661406625360Gallionella capsiferriformans ES-2 chromosome, complete genomeaddiction module killer protein5e-1579.7
NC_008751:1736512:174567017456701745984315Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF8916e-1476.3
NC_015731:2148517:216379221637922164130339Nitrosomonas sp. Is79A3 chromosome, complete genomeaddiction module killer protein1e-1375.1
NC_012751:1988280:200321020032102003506297Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module2e-1374.3
NC_011365:592256:638299638299638598300Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeaddiction module killer protein9e-1372.4
NC_014836:155924:177911177911178237327Desulfurispirillum indicum S5 chromosome, complete genomeaddiction module killer protein2e-1271.2
NC_009656:4527457:460252546025254602824300Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-1270.9
NC_008740:2989856:299716629971662997465300Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF8914e-1270.1
NC_009337:715500:757213757213757560348Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein8e-1268.9
NC_009925:1003000:101123410112341011518285Acaryochloris marina MBIC11017, complete genomeaddiction module toxin, putative1e-1168.6
NC_020829:5620826:562446156244615624763303Pseudomonas denitrificans ATCC 13867, complete genomeaddiction module killer protein2e-1167.4
NC_007512:2024880:204919220491922049539348Pelodictyon luteolum DSM 273, complete genomehypothetical protein3e-1167
NC_009337:715500:762264762264762569306Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein4e-1166.6
NC_007275:1:415441544453300Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completehypothetical protein1e-1065.1
NC_006513:3486558:348995834899583490182225Azoarcus sp. EbN1, complete genomehypothetical prophage protein3e-1063.9
NC_016043:471719:487327487327487644318Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein9e-0958.9
NC_016830:2247789:226251922625192262689171Pseudomonas fluorescens F113 chromosome, complete genomeaddiction module killer protein1e-0858.5
NC_014246:1402500:143441714344171434725309Mobiluncus curtisii ATCC 43063 chromosome, complete genomeaddiction module killer protein6e-0856.2
NC_019902:1061432:109445110944511094591141Thioalkalivibrio nitratireducens DSM 14787, complete genome7e-0856.2
NC_006513:3486558:349276834927683492992225Azoarcus sp. EbN1, complete genomehypothetical protein1e-0755.5
NC_014644:1:213432134321654312Gardnerella vaginalis ATCC 14019 chromosome, complete genomeaddiction module killer protein2e-0754.3
NC_009802:931129:937483937483937692210Campylobacter concisus 13826, complete genomehypothetical protein4e-0753.1
NC_011146:3089297:310020831002083100504297Geobacter bemidjiensis Bem, complete genome2e-0651.2
NC_014323:4792048:483540248354024835557156Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein3e-0650.4
NC_011206:1264639:128676812867681286914147Acidithiobacillus ferrooxidans ATCC 53993, complete genomeaddiction module killer protein3e-0650.4