Pre_GI: BLASTP Hits

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Query: NC_012582:272320:286669 Vibrio cholerae O395 chromosome chromosome I, complete sequence

Start: 286669, End: 287463, Length: 795

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae O395 is a classical O1 serotype strain of the Ogawa biotype. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:238580:252929252929253723795Vibrio cholerae IEC224 chromosome I, complete sequencelipopolysaccharide/O-antigen transport protein2e-135481
NC_016445:2663837:267818626781862678980795Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completelipopolysaccharide/O-antigen transport protein2e-135481
NC_012668:368305:385274385274386068795Vibrio cholerae MJ-1236 chromosome 1, complete sequenceO-antigen export system permease protein2e-135481
NC_012578:224559:238906238906239700795Vibrio cholerae M66-2 chromosome I, complete sequencelipopolysaccharide/O-antigen transport protein2e-135481
NC_009457:2764972:277932127793212780115795Vibrio cholerae O395 chromosome 2, complete sequencelipopolysaccharide/O-antigen transport protein2e-135481
NC_002505:238569:252918252918253712795Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completelipopolysaccharide/O-antigen transport protein2e-135481
NC_017270:220282:235932235932236705774Vibrio cholerae LMA3984-4 chromosome chromosome I, completeO-antigen export system, permease protein2e-130464
NC_008390:818571:823749823749824531783Burkholderia cepacia AMMD chromosome 1, complete sequenceABC-2 type transporter5e-23108
NC_009667:2860818:287482728748272875678852Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceABC-2 type transporter2e-22106
NC_013592:713036:727786727786728637852Dickeya dadantii Ech586, complete genomeABC-2 type transporter1e-22106
NC_016818:633750:659825659825660673849Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeABC-type polysaccharide/polyol phosphate export systems permease2e-22105
NC_012880:3125261:314040631404063141209804Dickeya dadantii Ech703, complete genomeABC-2 type transporter3e-22105
NC_011071:572346:575009575009575869861Stenotrophomonas maltophilia R551-3, complete genomeABC-2 type transporter3e-22105
NC_010676:3009980:302826630282663029045780Burkholderia phytofirmans PsJN chromosome 2, complete sequenceABC-2 type transporter5e-22104
NC_014837:2803447:281318628131862813986801Pantoea sp. At-9b chromosome, complete genomeABC-2 type transporter2e-21103
NC_010508:933862:939401939401940183783Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceABC-2 type transporter3e-21102
NC_007404:1964935:197525419752541976069816Thiobacillus denitrificans ATCC 25259, complete genomeABC transporter permease protein2e-1996.3
NC_016787:135677:139456139456140361906Corynebacterium diphtheriae HC03 chromosome, complete genomeO-antigen export system permease RfbA4e-1995.1
NC_016799:167362:167362167362168267906Corynebacterium diphtheriae 31A chromosome, complete genomeO-antigen export system permease RfbA5e-1994.7
NC_012791:821371:840479840479841282804Variovorax paradoxus S110 chromosome 1, complete genomeABC-2 type transporter7e-1994.4
NC_014500:4257145:426810942681094268897789Dickeya dadantii 3937 chromosome, complete genomeO-antigen export system permease RfbD9e-1994
NC_011147:2085241:209762320976232098393771Salmonella enterica subsp. enterica serovar Paratyphi A strpolysaccharide export ABC transporter permease1e-1893.6
NC_003197:776238:787336787336788106771Salmonella typhimurium LT2, complete genomeputative ABC transporter permease protein1e-1893.6
NC_010102:2322866:233598123359812336751771Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1893.6
NC_011080:780850:791947791947792717771Salmonella enterica subsp. enterica serovar Newport str. SL254,O-antigen export system, permease protein1e-1893.6
NC_011083:824659:835745835745836515771Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,O-antigen export system, permease protein1e-1893.6
NC_016810:775649:786747786747787517771Salmonella enterica subsp. enterica serovar Typhimurium strO-antigen export system, permease protein1e-1893.6
NC_016856:776735:787833787833788603771Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SABC transporter permease1e-1893.6
NC_016857:775649:786747786747787517771Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74ABC transporter permease1e-1893.6
NC_016860:816000:826166826166826936771Salmonella enterica subsp. enterica serovar Typhimurium strO-antigen ABC transporter permease protein1e-1893.6
NC_016863:776734:787832787832788602771Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1ABC transporter permease1e-1893.6
NC_017046:775636:786733786733787503771Salmonella enterica subsp. enterica serovar Typhimurium str. 798O-antigen export system, permease protein1e-1893.6
NC_009446:351042:366787366787367674888Dichelobacter nodosus VCS1703A, complete genomeABC-2 type transporter family protein1e-1893.6
NC_011094:842038:853136853136853906771Salmonella enterica subsp. enterica serovar Schwarzengrund strO-antigen export system, permease2e-1893.2
NC_014816:2446236:247112924711292471926798Asticcacaulis excentricus CB 48 chromosome 1, complete sequence4e-1891.7
NC_003198:751779:762594762594763364771Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-1787.8
NC_011985:3892630:391433139143313915167837Agrobacterium radiobacter K84 chromosome 1, complete genomeglycosyl transferase2e-1686.3
NC_012704:2347969:236731123673112368270960Corynebacterium kroppenstedtii DSM 44385, complete genomeABC-type transport system, permease protein8e-1684.3
NC_012522:4299287:430019643001964301068873Rhodococcus opacus B4, complete genomeputative ABC transporter permease protein2e-1583.2
NC_007492:4563981:458794445879444588741798Pseudomonas fluorescens PfO-1, complete genomeABC-22e-1582.8
NC_013093:125363:144188144188145099912Actinosynnema mirum DSM 43827, complete genomeABC-2 type transporter2e-1479.3
NC_014722:2260489:227124622712462271899654Burkholderia rhizoxinica HKI 454, complete genomepolysaccharide export ABC transporter permease protein3e-1479
NC_013159:148180:163178163178164068891Saccharomonospora viridis DSM 43017, complete genomeABC-type polysaccharide/polyol phosphate export systems, permease component4e-1478.6
NC_011528:1492000:149462714946271495490864Coxiella burnetii CbuK_Q154, complete genomeO-antigen export system permease protein6e-1374.7
NC_011527:1255998:125786612578661258729864Coxiella burnetii CbuG_Q212, complete genomeO-antigen export system permease protein6e-1271.2
NC_009445:5388822:538882253888225389664843Bradyrhizobium sp. ORS 278 chromosome, complete genomeO-antigene/LPS export system permease8e-1270.9
NC_004310:508483:518999518999519781783Brucella suis 1330 chromosome I, complete sequenceO-antigen export system permease protein RfbD4e-0962
NC_010169:527500:536987536987537769783Brucella suis ATCC 23445 chromosome I, complete sequenceO-antigen export system permease protein rfbD4e-0962
NC_010103:507482:517642517642518424783Brucella canis ATCC 23365 chromosome I, complete sequenceO-antigen export system permease protein rfbD4e-0962
NC_012441:529500:539107539107539889783Brucella melitensis ATCC 23457 chromosome I, complete sequenceO-antigen export system permease rfbD4e-0962
NC_013119:511500:521124521124521906783Brucella microti CCM 4915 chromosome 1, complete sequenceO-antigen export system permease protein RfbD4e-0962
NC_016797:508414:518930518930519712783Brucella suis VBI22 chromosome I, complete sequenceO-antigen export system permease protein RfbD4e-0962
NC_017248:529500:539153539153539935783Brucella melitensis NI chromosome chromosome I, complete sequencehypothetical protein4e-0962
NC_017251:508469:518985518985519767783Brucella suis 1330 chromosome I, complete genomeO-antigen export system permease protein RfbD4e-0962
NC_006932:531000:540621540621541403783Brucella abortus biovar 1 str. 9-941 chromosome I, completeRfbD, O-antigen export system permease protein5e-0961.6
NC_007618:526400:536916536916537698783Brucella melitensis biovar Abortus 2308 chromosome I, completeABC transporter, family 2:Acriflavin resistance protein5e-0961.6
NC_010742:529500:538937538937539734798Brucella abortus S19 chromosome 1, complete sequenceO-antigen export system permease protein RFBD5e-0961.6
NC_003317:1443874:146324814632481464045798Brucella melitensis 16M chromosome I, complete sequenceO-ANTIGEN EXPORT SYSTEM PERMEASE PROTEIN RFBD5e-0961.6
NC_009505:531000:540620540620541417798Brucella ovis ATCC 25840 chromosome I, complete sequencehypothetical protein5e-0961.6
NC_015857:531314:541299541299542081783Brucella pinnipedialis B2/94 chromosome chromosome 1, completeO-antigen export system permease RfbD9e-0960.8
NC_015578:1633393:165394816539481654724777Treponema primitia ZAS-2 chromosome, complete genomeO-antigen export system permease RfbA6e-0754.7
NC_009454:2663539:268232226823222683101780Pelotomaculum thermopropionicum SI, complete genomeABC-type polysaccharide/polyol phosphate export systems, permease component9e-0754.3
NC_015458:3328905:333856633385663339363798Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein1e-0653.9
NC_010694:1502019:151377315137731514540768Erwinia tasmaniensis, complete genomeO-antigen ABC transporter permease2e-0653.1
NC_014387:177308:193380193380194162783Butyrivibrio proteoclasticus B316 chromosome 1, complete genomepolysaccharide ABC transporter permease4e-0652
NC_012913:626449:632965632965633753789Aggregatibacter aphrophilus NJ8700, complete genomeABC transporter integral membrane subunit5e-0652
NC_002977:652481:662275662275663102828Methylococcus capsulatus str. Bath, complete genomecarbohydrate ABC-transporter, permease protein, putative7e-0651.2