Pre_GI: BLASTP Hits

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Query: NC_011988:1036618:1052613 Agrobacterium vitis S4 chromosome 2, complete genome

Start: 1052613, End: 1053755, Length: 1143

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010508:809974:8189278189278200661140Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencepolysaccharide export protein2e-42172
NC_020453:3179346:3194438319443831956191182Agromonas oligotrophica S58 DNA, complete genomecapsule polysaccharide export outer membrane protein3e-42172
NC_011004:4045277:4065182406518240663901209Rhodopseudomonas palustris TIE-1, complete genomepolysaccharide export protein1e-41170
NC_005296:3783348:3803244380324438044641221Rhodopseudomonas palustris CGA009, complete genomeputative capsule polysaccharide export outer membrane protein2e-41170
NC_015579:53500:6737167371685581188Novosphingobium sp. PP1Y plasmid Lpl, complete sequencepolysaccharide export protein2e-40166
NC_008542:855347:8648308648308660591230Burkholderia cenocepacia HI2424 chromosome 1, complete sequencepolysaccharide export protein3e-40166
NC_008060:306170:3156563156563168851230Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencepolysaccharide export protein3e-40166
NC_011000:3514338:3550131355013135513031173Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis/export protein1e-39164
NC_014006:2999500:3003484300348430047011218Sphingobium japonicum UT26S chromosome 1, complete genomepolysaccharide export outer membrane protein1e-39164
NC_007510:759905:7685677685677697631197Burkholderia sp. 383 chromosome 1, complete sequencePolysaccharide export protein9e-40164
NC_010682:1234769:1248347124834712495131167Ralstonia pickettii 12J chromosome 1, complete sequencepolysaccharide export protein9e-40164
NC_009074:3163362:3189215318921531903361122Burkholderia pseudomallei 668 chromosome I, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein2e-39163
NC_008785:516500:5238395238395249601122Burkholderia mallei SAVP1 chromosome II, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein2e-39163
NC_009076:3179662:3205515320551532066361122Burkholderia pseudomallei 1106a chromosome I, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein2e-39163
NC_009080:2123987:2149840214984021509611122Burkholderia mallei NCTC 10247 chromosome II, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein2e-39163
NC_007434:3588081:3613934361393436150971164Burkholderia pseudomallei 1710b chromosome I, complete sequenceWcbC2e-39163
NC_006348:2372945:2398798239879823999611164Burkholderia mallei ATCC 23344 chromosome 1, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein2e-39163
NC_006350:3329477:3355330335533033564931164Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative capsular polysaccharide biosynthesis/export protein2e-39163
NC_008836:1072721:1098574109857410997101137Burkholderia mallei NCTC 10229 chromosome II, complete sequencecapsular polysaccharide biosynthesis/export periplasmic protein2e-39163
NC_010814:1551624:1612640161264016138331194Geobacter lovleyi SZ, complete genomepolysaccharide export protein2e-37156
NC_017033:3013654:3022942302294230241081167Frateuria aurantia DSM 6220 chromosome, complete genomeperiplasmic protein involved in polysaccharide export6e-37155
NC_017512:2161000:2173040217304021742031164Neisseria meningitidis WUE 2594, complete genomecapsule export outer-membrane lipoprotein CtrA1e-36154
NC_015381:766355:7773387773387785221185Burkholderia gladioli BSR3 chromosome 1, complete sequencePolysaccharide export protein1e-36154
NC_017515:76861:8319083190843651176Neisseria meningitidis M04-240196 chromosome, complete genomecapsule polysaccharide export outer membrane protein CtrA9e-36151
NC_014664:2669562:2686003268600326871571155Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomepolysaccharide export protein2e-35150
NC_008639:2702662:2722785272278527238761092Chlorobium phaeobacteroides DSM 266, complete genomepolysaccharide export protein6e-35148
NC_015593:2841856:2862107286210728632791173Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completepolysaccharide export protein8e-35148
NC_013422:1604157:1607943160794316091691227Halothiobacillus neapolitanus c2, complete genomepolysaccharide export protein4e-33142
NC_010125:2483122:2502401250240125036121212Gluconacetobacter diazotrophicus PAl 5, complete genomeputative polysaccharide export protein9e-33141
NC_016027:2047954:2057366205736620586731308Gluconacetobacter xylinus NBRC 3288, complete genomecapsule polysaccharide export protein3e-32139
NC_017082:6444522:6507989650798965091821194Bradyrhizobium sp. S23321, complete genomepolysaccharide export protein5e-32138
NC_011365:738321:7558257558257569851161Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomepolysaccharide export protein1e-31137
NC_016027:2047954:2094974209497420963411368Gluconacetobacter xylinus NBRC 3288, complete genomecapsule polysaccharide export protein6e-31135
NC_006677:1596560:1623351162335116245591209Gluconobacter oxydans 621H, complete genomeCapsule polysaccharide export protein4e-29129
NC_010170:2374852:2385033238503323861361104Bordetella petrii, complete genomeouter membrane protein involved in polysaccharide1e-26120
NC_015976:1064888:1069660106966010707991140Sphingobium sp. SYK-6, complete genomeputative capsule polysaccharide export outer membrane protein1e-25117
NC_009512:4375452:4385739438573943868031065Pseudomonas putida F1, complete genomepolysaccharide export protein7e-25115
NC_011761:2641481:2665813266581326669851173Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completecapsule polysaccharide export protein, BexD/CtrA/VexA family2e-22107
NC_011206:2549132:2565631256563125668241194Acidithiobacillus ferrooxidans ATCC 53993, complete genomepolysaccharide export protein2e-22107
NC_015633:461143:4635934635934647531161Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein6e-21102
NC_012691:3126500:3146464314646431477111248Tolumonas auensis DSM 9187, complete genomepolysaccharide export protein4e-2099.4
NC_010804:671081:6828936828936839901098Burkholderia multivorans ATCC 17616 chromosome 1, completepolysaccharide export outer membrane protein1e-1997.4
NC_010084:2822295:2840783284078328419131131Burkholderia multivorans ATCC 17616 chromosome 1, completepolysaccharide export protein2e-1997.4
NC_010623:188143:2048552048552060271173Burkholderia phymatum STM815 chromosome 2, complete sequencepolysaccharide export protein3e-1996.3
NC_012917:1506083:1513147151314715142831137Pectobacterium carotovorum subsp. carotovorum PC1, complete genomepolysaccharide export protein2e-1893.6
NC_014839:253961:2624842624842636231140Pantoea sp. At-9b plasmid pPAT9B02, complete sequencepolysaccharide export protein2e-1893.6
NC_011001:1462532:1469947146994714711281182Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative polysaccharide export protein3e-1893.2
NC_015567:1660462:1676480167648016776161137Serratia sp. AS9 chromosome, complete genomepolysaccharide export protein3e-1893.2
NC_015566:1659288:1676468167646816776041137Serratia sp. AS12 chromosome, complete genomepolysaccharide export protein3e-1893.2
NC_007952:1453000:1456808145680814578661059Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative capsular polysaccharide transport outermembrane protein5e-1892.4
NC_005139:343500:3439443439443451761233Vibrio vulnificus YJ016 chromosome I, complete sequenceouter membrane capsular polysaccharide transport protein3e-1789.7
NC_007489:42500:4544345443465251083Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequencePolysaccharide export protein3e-1789.7
NC_012214:1588573:1592479159247915936211143Erwinia pyrifoliae Ep1/96, complete genomeexport outer membrane protein Wza (synonym for CpsH, similar to AmsH), involved in exopolysaccharid synthesis4e-1789.4
NC_015061:3840463:3897283389728338984251143Rahnella sp. Y9602 chromosome, complete genomepolysaccharide export protein5e-1789
NC_013421:3279499:3305691330569133068271137Pectobacterium wasabiae WPP163, complete genomepolysaccharide export protein6e-1789
NC_014121:3483976:3507532350753235087641233Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completepolysaccharide export protein1e-1687.8
NC_017047:3936624:3958958395895839600911134Rahnella aquatilis HX2 chromosome, complete genomepolysaccharide export protein Wza2e-1687
NC_014500:1491660:1499292149929215004281137Dickeya dadantii 3937 chromosome, complete genomecapsule polysaccharide export protein5e-1685.9
NC_016602:103878:1419501419501430861137Vibrio furnissii NCTC 11218 chromosome 1, complete sequencePeriplasmic protein involved in capsular polysaccharide export4e-1685.9
NC_015376:965000:9772579772579784261170Burkholderia gladioli BSR3 chromosome chromosome 2, completepolysaccharide export protein8e-1685.1
NC_020064:1547524:1555311155531115564471137Serratia marcescens FGI94, complete genomeperiplasmic protein involved in polysaccharide export8e-1685.1
NC_020211:1704500:1712997171299717141331137Serratia marcescens WW4, complete genomelipoprotein required for capsular polysaccharide translocation through the outer membrane9e-1684.7
NC_009254:1116174:1139689113968911408611173Burkholderia vietnamiensis G4 chromosome 3, complete sequencepolysaccharide export protein1e-1584.7
NC_009800:2156091:2175221217522121763571137Escherichia coli HS, complete genomepolysaccharide biosynthesis/export protein2e-1584
NC_016147:1435000:1453924145392414550211098Pseudoxanthomonas spadix BD-a59 chromosome, complete genomepolysaccharide export protein2e-1584
NC_012125:4559990:4564832456483245658991068Salmonella enterica subsp. enterica serovar Paratyphi C strainVi polysaccharide export protein2e-1583.6
NC_004547:1600900:1607969160796916091051137Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative polysaccharide export protein3e-1583.2
NC_016818:3887000:3907932390793239090651134Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein involved in polysaccharide export3e-1582.8
NC_011283:1690193:1699259169925917003921134Klebsiella pneumoniae 342 chromosome, complete genomecapsule polysaccharide biosynthesis/export protein GfcE4e-1582.8
NC_015684:2369651:238120523812052381753549Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein5e-1582.4
NC_011386:1727203:174271917427191743267549Oligotropha carboxidovorans OM5, complete genomepolysaccharide export protein5e-1582.4
NC_015663:4950000:5001409500140950025481140Enterobacter aerogenes KCTC 2190 chromosome, complete genomepolysaccharide export protein Wza5e-1582.4
NC_021066:460292:4696784696784708141137Raoultella ornithinolytica B6, complete genomepolysaccharide export protein Wza7e-1582
NC_007952:2812996:2816075281607528171271053Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative polysaccharide export, outer membrane protein, epsA8e-1581.6
NC_016832:4482437:4487279448727944883461068Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Vi polysaccharide export protein vexA/tviF8e-1581.6
NC_003198:4513900:4515425451542545164921068Salmonella enterica subsp. enterica serovar Typhi str. CT18,Vi polysaccharide export protein8e-1581.6
NC_004631:4494000:4499011449901145000781068Salmonella enterica subsp. enterica serovar Typhi Ty2, completeVi polysaccharide export protein8e-1581.6
NC_013355:1332263:1344199134419913453021104Zymomonas mobilis subsp. mobilis NCIB 11163, complete genomepolysaccharide export protein1e-1481.3
NC_013850:1658010:1667064166706416682031140Klebsiella variicola At-22 chromosome, complete genomepolysaccharide export protein1e-1480.9
NC_010676:61098:7086570865720371173Burkholderia phytofirmans PsJN chromosome 2, complete sequencepolysaccharide export protein2e-1480.5
NC_004757:2451919:2468173246817324693901218Nitrosomonas europaea ATCC 19718, complete genomePolysaccharide export protein6e-1479
NC_008781:3365468:3395688339568833968631176Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide export protein6e-1478.6
NC_020181:360500:3716303716303727661137Enterobacter aerogenes EA1509E, complete genomePolysaccharide export lipoprotein Wza8e-1478.2
NC_017047:3907854:3922992392299239240171026Rahnella aquatilis HX2 chromosome, complete genomepolysaccharide export protein Wza1e-1378.2
NC_015061:3840463:3855601385560138567311131Rahnella sp. Y9602 chromosome, complete genomepolysaccharide export protein3e-1376.6
NC_007712:1601499:1612003161200316131391137Sodalis glossinidius str. 'morsitans', complete genomeamylovoran export outer membrane protein AmsH4e-1376.3
NC_016818:3851542:3867325386732538684551131Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeperiplasmic protein involved in polysaccharide export5e-1375.9
NC_009832:1719149:1727572172757217287081137Serratia proteamaculans 568, complete genomepolysaccharide export protein5e-1375.9
NC_015458:3390674:3393375339337533944931119Pusillimonas sp. T7-7 chromosome, complete genomepolysaccharide export protein1e-1274.7
NC_007348:2115152:2149622214962221507971176Ralstonia eutropha JMP134 chromosome 2, complete sequencePolysaccharide export protein4e-1272.8
NC_012559:768939:7946657946657956901026Laribacter hongkongensis HLHK9, complete genomePutative capsular polysaccharide export protein6e-1272
NC_016613:221476:2449942449942461301137Vibrio sp. EJY3 chromosome 1, complete sequencepolysaccharide export protein Wza8e-1271.6
NC_011753:206178:2061782061782073141137Vibrio splendidus LGP32 chromosome 1, complete genomeputative periplasmic protein involved in capsular polysaccharide export (wza)8e-1271.6
NC_013410:921187:9424569424569435801125Fibrobacter succinogenes subsp. succinogenes S85 chromosome,polysaccharide export protein1e-1171.6
NC_014924:3270547:3277340327734032784491110Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomepolysaccharide export protein1e-1171.2
NC_014121:1038554:1047714104771410488531140Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative polysaccharide export protein1e-1171.2
NC_011662:1211660:1216366121636612176611296Thauera sp. MZ1T, complete genomepolysaccharide export protein1e-1170.9
NC_008781:3302934:3325841332584133270941254Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide export protein2e-1170.9
NC_015723:1486000:1509706150970615108451140Cupriavidus necator N-1 chromosome 2, complete sequencepolysaccharide export outer membrane protein EpsA2e-1170.5
NC_011566:1597751:1617896161789616189751080Shewanella piezotolerans WP3, complete genomePeriplasmic protein involved in capsular polysaccharide export3e-1170.1
NC_008570:3220539:3234098323409832352131116Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecapsular polysaccharide transport protein3e-1169.7
NC_014931:5088125:5112099511209951131721074Variovorax paradoxus EPS chromosome, complete genomepolysaccharide export protein3e-1066.6
NC_012791:2052923:2058726205872620598441119Variovorax paradoxus S110 chromosome 1, complete genomepolysaccharide export protein1e-0964.3
NC_009483:1936486:1936486193648619375291044Geobacter uraniireducens Rf4 chromosome, complete genomepolysaccharide export protein2e-0963.5
NC_007947:2140000:216640221664022167214813Methylobacillus flagellatus KT, complete genomepolysaccharide export protein2e-0860.8
NC_008536:5861495:5866541586654158675931053Solibacter usitatus Ellin6076, complete genomepolysaccharide export protein4e-0859.7
NC_011145:4960940:4960940496094049620461107Anaeromyxobacter sp. K, complete genomepolysaccharide export protein4e-0859.3
NC_011891:4931961:4931961493196149330671107Anaeromyxobacter dehalogenans 2CP-1, complete genomepolysaccharide export protein8e-0858.5
NC_007492:4310828:4334469433446943355841116Pseudomonas fluorescens PfO-1, complete genomePolysaccharide export protein7e-0858.5
NC_014654:646500:6590596590596601771119Halanaerobium sp. 'sapolanicus' chromosome, complete genomepolysaccharide export protein1e-0757.8
NC_016603:3181592:3184227318422731853271101Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomepolysaccharide export protein2e-0757.4
NC_017068:1788235:181607218160721816791720Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative polysaccharide export protein2e-0757
NC_007760:4911181:4914033491403349151391107Anaeromyxobacter dehalogenans 2CP-C, complete genomePolysaccharide export protein2e-0757
NC_014963:2946212:2969049296904929700621014Terriglobus saanensis SP1PR4 chromosome, complete genomepolysaccharide export protein8e-0755.1
NC_007512:1539095:1547465154746515485531089Pelodictyon luteolum DSM 273, complete genomecapsular polysaccharide export protein, putative2e-0653.9