Pre_GI: BLASTP Hits

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Query: NC_011770:3396637:3408302 Pseudomonas aeruginosa LESB58, complete genome

Start: 3408302, End: 3409174, Length: 873

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007509:309348:319418319418320296879Burkholderia sp. 383 chromosome 3, complete sequencePhytanoyl-CoA dioxygenase4e-97354
NC_012522:3224526:324844832484483249311864Rhodococcus opacus B4, complete genomehypothetical protein4e-32138
NC_015976:2150676:215372121537212154635915Sphingobium sp. SYK-6, complete genomephytanoyl-CoA dioxygenase3e-31135
NC_011770:3396637:339813133981313398997867Pseudomonas aeruginosa LESB58, complete genomehypothetical protein2e-30133
NC_007509:309348:327215327215328090876Burkholderia sp. 383 chromosome 3, complete sequencePhytanoyl-CoA dioxygenase8e-30130
NC_017904:4203257:420854942085494209412864Mycobacterium sp. MOTT36Y chromosome, complete genomephytanoyl-CoA dioxygenase (PhyH) family protein1e-23110
NC_010612:2777687:278257227825722783393822Mycobacterium marinum M, complete genomehypothetical protein1e-0860.8
NC_008380:855246:869484869484870305822Rhizobium leguminosarum bv. viciae 3841, complete genomeputative deoxygenase1e-0860.5
NC_019950:1689910:169523216952321696053822Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein3e-0859.3
NC_002945:1680751:168863616886361689457822Mycobacterium bovis AF2122/97, complete genomehypothetical protein7e-0858.2
NC_002755:1684161:169204616920461692867822Mycobacterium tuberculosis CDC1551, complete genomemmcH protein, putative7e-0858.2
NC_012207:1681971:168985616898561690677822Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein7e-0858.2
NC_008769:1709078:171696317169631717784822Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein7e-0858.2
NC_015848:1708176:171606117160611716882822Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein7e-0858.2
NC_009525:1685522:169340716934071694228822Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein7e-0858.2
NC_000962:1684005:169189016918901692711822Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein7e-0858.2
NC_012943:2707677:272075527207552721576822Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein7e-0858.2
NC_016768:2704350:271742827174282718249822Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein7e-0858.2
NC_016804:1679357:168724216872421688063822Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein7e-0858.2
NC_017026:1686500:169290616929061693727822Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein7e-0858.2
NC_009565:1688642:169652716965271697348822Mycobacterium tuberculosis F11, complete genomehypothetical protein6e-0858.2
NC_009719:3532587:355131635513163552140825Parvibaculum lavamentivorans DS-1 chromosome, complete genomephytanoyl-CoA dioxygenase2e-0653.5