Pre_GI: BLASTP Hits

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Query: NC_011601:4096427:4108906 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4108906, End: 4110126, Length: 1221

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:4470932:4482484448248444837041221Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePas0814
NC_013008:4643825:4654119465411946553391221Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system component0814
NC_011353:4688000:4698078469807846992981221Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus protein, YscD/HrpQ family0814
NC_002655:4653160:4663957466395746651771221Escherichia coli O157:H7 EDL933, complete genomeescD0814
NC_002695:4584177:4594974459497445961941221Escherichia coli O157:H7 str. Sakai, complete genomeEscD0814
AP010958:3669500:3684881368488136861011221Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscD0783
NC_013353:3669500:3684881368488136861011221Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscD0783
NC_013361:5319497:5357699535769953589191221Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscD0783
NC_013364:3701895:3726522372652237277421221Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscD0769
NC_014012:2565329:2584524258452425857321209Shewanella violacea DSS12, complete genometype III secretion system apparatus protein, YscD/HrpQ family1e-36154
NC_010067:1507823:1533538153353815347491212Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-25116
NC_017046:1428272:1438811143881114400101200Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein7e-24112
NC_003198:1621347:1643582164358216447931212Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein5e-24112
NC_006905:1509093:1519619151961915208301212Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaD5e-24112
NC_004631:1325817:1336343133634313375541212Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein5e-24112
NC_012125:2360815:2383050238305023842491200Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein5e-24112
NC_016832:1324820:1335328133532813365271200Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion apparatus protein, YscD/HrpQ5e-24112
NC_011083:1476894:1487403148740314886021200Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus protein, YscD/HrpQ family4e-24112
NC_011080:1470794:1481329148132914825281200Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein, YscD/HrpQ family1e-23111
NC_011205:1852665:1874900187490018760991200Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein, YscD/HrpQ family1e-23111
NC_010102:1616530:1638826163882616400371212Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-23111
NC_003197:1471349:1481876148187614830871212Salmonella typhimurium LT2, complete genomevirulence protein8e-24111
NC_016810:1428201:1438728143872814399391212Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein8e-24111
NC_016856:1481325:1491852149185214930631212Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein8e-24111
NC_016857:1428201:1438728143872814399391212Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein8e-24111
NC_016860:1469066:1479563147956314807741212Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein8e-24111
NC_016863:1429516:1440043144004314412541212Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence protein8e-24111
NC_011274:1763676:1785911178591117871221212Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein2e-23110
NC_011294:1723852:1746087174608717472981212Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein2e-23110
NC_006511:1506915:1529210152921015304211212Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein1e-23110
NC_011147:1502096:1524391152439115256021212Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein1e-23110
NC_011094:1435347:1445855144585514470541200Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein, YscD/HrpQ family protein1e-23110
NC_011149:1710601:1732896173289617340951200Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein, YscD/HrpQ family4e-23109
NC_016831:1236786:1247322124732212485211200Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein4e-23109