Pre_GI: BLASTP Hits

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Query: NC_011094:638552:665161 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 665161, End: 665697, Length: 537

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1391971:140168414016841402217534Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-63240
NC_011083:1993672:201452820145282015061534Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protein gp557e-63239
NC_011294:1220526:124796412479641248497534Salmonella enterica subsp. enterica serovar Enteritidis strexported phage protein7e-63239
NC_003197:1945858:196550719655071966040534Salmonella typhimurium LT2, complete genomephage-tail assembly-like protein6e-63239
NC_016810:1903426:192307519230751923608534Salmonella enterica subsp. enterica serovar Typhimurium strexported bacteriophage protein6e-63239
NC_016856:1957263:197691219769121977445534Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage-tail assembly-like protein6e-63239
NC_016857:1903426:192307519230751923608534Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage-tail assembly-like protein6e-63239
NC_016860:1943203:196104819610481961581534Salmonella enterica subsp. enterica serovar Typhimurium strphage tail assembly-like protein6e-63239
NC_016863:1905454:192510319251031925636534Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage-tail assembly-like protein6e-63239
NC_017046:1902788:192243819224381922971534Salmonella enterica subsp. enterica serovar Typhimurium str. 798exported bacteriophage protein6e-63239
NC_009792:1770106:177370917737091774260552Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-46184
NC_016612:3803130:382632538263253826837513Klebsiella oxytoca KCTC 1686 chromosome, complete genomeprotein gp552e-45181
NC_010473:1712984:172667917266791727176498Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; conserved protein4e-43174
NC_011751:1859606:186894618689461869443498Escherichia coli UMN026 chromosome, complete genomehypothetical protein4e-43174
CU928160:1668842:167705316770531677550498Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; Qin prophage4e-43174
AC_000091:1627049:164074416407441641241498Escherichia coli W3110 DNA, complete genomehypothetical protein4e-43174
CP002516:2305659:232633423263342326831498Escherichia coli KO11, complete genomeProtein of unknown function DUF25144e-43174
NC_000913:1625500:163705416370541637551498Escherichia coli K12, complete genomeQin prophage; conserved protein4e-43174
CP002185:1770815:177902517790251779522498Escherichia coli W, complete genomeQin prophage; conserved protein4e-43174
NC_011750:1565000:157360915736091574106498Escherichia coli IAI39 chromosome, complete genomehypothetical protein4e-43174
NC_011741:1668842:167705316770531677550498Escherichia coli IAI1 chromosome, complete genomehypothetical protein4e-43174
NC_012759:1517500:152911315291131529610498Escherichia coli BW2952 chromosome, complete genomeQin prophage protein4e-43174
NC_013361:2138716:214810421481042148601498Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-43174
NC_016902:2305659:232633423263342326831498Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-43174
NC_020181:2097066:210162621016262102138513Enterobacter aerogenes EA1509E, complete genomePhage endopeptidase Rz4e-43173
NC_010468:2265423:228329222832922283774483Escherichia coli ATCC 8739, complete genomephage-tail assembly-like protein4e-43173
NC_013941:5317424:532630753263075326798492Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-42172
NC_011740:4520373:452896745289674529464498Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; Qin prophage1e-42172
NC_011742:4962008:497149849714984971995498Escherichia coli S88 chromosome, complete genomehypothetical protein2e-42171
NC_004431:3040953:304926030492603049757498Escherichia coli CFT073, complete genomeHypothetical protein ydfP precursor2e-42171
NC_008563:5011997:502148850214885021985498Escherichia coli APEC O1, complete genomehypothetical protein2e-42171
NC_012967:1593101:161122416112241611721498Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-42171
NC_009800:1657550:166809016680901668587498Escherichia coli HS, complete genomehypothetical protein5e-42170
NC_010102:1137247:115193511519351152345411Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-34144
NC_015761:1017301:102720610272061027496291Salmonella bongori NCTC 12419, complete genome6e-21100
NC_011080:1944226:197051319705131970824312Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-2199.8
NC_015761:1017301:102583710258371026379543Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-1064.7