Pre_GI: BLASTP Hits

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Query: NC_011094:2115750:2130186 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2130186, End: 2131265, Length: 1080

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2009388:2023221202322120243001080Salmonella enterica subsp. enterica serovar Enteritidis strphage protein0724
NC_011205:2137696:2151528215152821526071080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein0724
NC_010102:1779707:1802789180278918038681080Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0724
NC_007712:1182518:1195147119514711962171071Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-128457
NC_008258:269806:2718452718452729031059Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-121436
NC_011740:621408:6234476234476245051059Escherichia fergusonii ATCC 35469, complete genomeputative baseplate J-like phage protein6e-120431
NC_011750:2928990:2940628294062829416861059Escherichia coli IAI39 chromosome, complete genomeputative baseplate J-like phage protein5e-120431
NC_008563:2909945:2923831292383129248891059Escherichia coli APEC O1, complete genomebacteriophage V tail protein5e-120431
NC_007946:2894793:2908804290880429098621059Escherichia coli UTI89, complete genomebacteriophage V tail protein4e-120431
NC_011742:2823000:2841141284114128421991059Escherichia coli S88 chromosome, complete genomebaseplate J-like phage protein4e-120431
NC_009436:2776410:2790564279056427916221059Enterobacter sp. 638, complete genomebaseplate J family protein8e-119427
NC_016810:2027311:204505920450592045604546Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage protein3e-97355
NC_017046:2026672:204442020444202044944525Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein4e-97355
NC_016863:2029340:204708820470882047612525Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-97355
NC_016863:2029340:204653220465322047053522Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-95350
NC_017046:2026672:204386420438642044385522Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein1e-94347
NC_016810:2027311:204450320445032045024522Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage protein1e-94347
AC_000091:1191353:120783712078371208499663Escherichia coli W3110 DNA, complete genomehypothetical protein1e-72273
NC_000913:1188999:120548312054831206145663Escherichia coli K12, complete genomee14 prophage; conserved protein1e-72273
NC_002937:255790:2580502580502591111062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative2e-56219
NC_002937:2933000:2951774295177429528351062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative5e-56218
NC_002947:4362271:4384490438449043855331044Pseudomonas putida KT2440, complete genomephage FluMu protein gp474e-40165
NC_000907:1568867:1589241158924115903081068Haemophilus influenzae Rd KW20, complete genomehypothetical protein6e-39161
NC_014228:3282500:3311254331125433123271074Xenorhabdus nematophila ATCC 19061, complete genomeputative bacteriophage protein8e-38157
NC_015733:1398083:1398968139896813999991032Pseudomonas putida S16 chromosome, complete genomephage FluMu protein gp473e-37155
NC_012660:4558122:458160345816034582274672Pseudomonas fluorescens SBW25 chromosome, complete genome2e-30133
NC_009800:2049346:2070534207053420716821149Escherichia coli HS, complete genomeputative baseplate J protein1e-24114
NC_011365:592256:6301736301736312641092Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomebaseplate J family protein2e-24113
NC_002927:3827211:3837547383754738386171071Bordetella bronchiseptica RB50, complete genomeputative phage tail protein2e-22107
NC_012559:1888000:189030918903091891148840Laribacter hongkongensis HLHK9, complete genomeProbable phage FluMu protein gp473e-1892.8
NC_016628:373815:3959663959663970121047Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage protein1e-1687.8
NC_012751:899394:912848912848913759912Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage baseplate J-like protein4e-1685.9
NC_014652:801653:8283658283658294471083Caldicellulosiruptor hydrothermalis 108 chromosome, completebaseplate j family protein5e-1582.4
NC_009633:2592000:2597032259703225981681137Alkaliphilus metalliredigens QYMF chromosome, complete genomebaseplate J family protein3e-1376.6
NC_011837:1935294:1939120193912019402501131Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1376.6
NC_009706:2003194:2007608200760820087381131Clostridium kluyveri DSM 555 chromosome, complete genomeXkdT-like protein3e-1376.6
NC_009706:1935418:1939244193924419403741131Clostridium kluyveri DSM 555 chromosome, complete genomeXkdT related phage protein3e-1376.6
NC_018604:305957:3438113438113448571047Brachyspira pilosicoli WesB complete genomehypothetical protein4e-1375.9
NC_009706:3291330:3318380331838033195071128Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein5e-1375.5
NC_011837:3226500:3249882324988232509941113Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1375.5
NC_010674:2817651:2827773282777328288941122Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein1e-1274.3
NC_012563:2566500:2570289257028925714191131Clostridium botulinum A2 str. Kyoto, complete genomeputative baseplate J-like protein3e-1273.2
NC_009495:2479465:2482266248226624833961131Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein6e-1168.6
NC_012673:1:3613136131372791149Exiguobacterium sp. AT1b, complete genomeBaseplate J family protein1e-1067.8
NC_013216:4404085:4418636441863644197661131Desulfotomaculum acetoxidans DSM 771, complete genomeBaseplate J family protein1e-0964.3
NC_013406:6052913:6064990606499060661441155Paenibacillus sp. Y412MC10 chromosome, complete genomeBaseplate J family protein1e-0861.2
NC_014483:1179286:1191720119172011928711152Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein1e-0860.8
NC_018664:1573925:1581997158199715831241128Clostridium acidurici 9a chromosome, complete genomeputative baseplate J family protein2e-0757.4
NC_016047:261304:2689852689852700311047Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein3e-0756.6
NC_020291:795500:8399728399728410601089Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomebaseplate J family protein5e-0755.8
NC_013406:6052913:6052913605291360539711059Paenibacillus sp. Y412MC10 chromosome, complete genomeBaseplate J family protein4e-0755.8
UCMB5137:861734:8783668783668794121047Bacillus atrophaeus UCMB-5137BATR1942_04035; putative phage capsid assembly protein; skin element; (location [796051:797098] strand +); from Bacillus atrophaeus 1942, complete gen4e-0755.8
NC_016077:1388775:1398561139856113995801020Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein7e-0755.1
NC_016641:2950000:2960522296052229616731152Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein8e-0755.1
NC_014976:627935:6541406541406551861047Bacillus subtilis BSn5 chromosome, complete genomeputative phage capsid assembly protein2e-0653.9
NC_020291:795500:8535298535298545721044Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage Mu protein-like protein gp474e-0652.8
NC_014376:1472304:1506656150665615076661011Clostridium saccharolyticum WM1 chromosome, complete genomeBaseplate J family protein5e-0652.4
NC_007519:3355768:3356201335620133573641164Desulfovibrio alaskensis G20 chromosome, complete genomebaseplate assembly protein5e-0652.4